Neoarius graeffei (lesser salmon catfish): 132901365
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Entry
132901365 CDS
T10798
Symbol
synrg
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132901365 (synrg)
Membrane trafficking [BR:
ngra04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
132901365 (synrg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
132901365
NCBI-ProteinID:
XP_060799678
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All DBs
Position
17:10159463..10272222
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AA seq
1352 aa
AA seq
DB search
MSKKVTQTTQTVDLCHCFSKECFMYPVGGGLGPPQGMMPMQQQQQQQGFPMVPVMQPNMQ
GMMGMNFGAQMPTGPMPMQGGMAMGMQPPGMQFMGQPQFMGMRATGPQYPADLQKQMAEE
HQKRLEQQQRMLEEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRD
AKMHPTPSSQSKKPDSSPSHSSVPPHSLSPAFAEEDDEFSDFIQGPVEASFPSSSLPLSS
SSSGVSRSPLEAGPGQQPSSSPLPFSLAPSLPTLTVPHHSSVISSSQSTFQGPSLEEKLF
SSCDLTVDKKAQVNFKSRQAMSELAPRAPVSVHFQSSSRAHNWAQCSDDLSAAFTVEKTP
EPPTASPAPTAAEAQPHQASSASAGVGVYPQQEMQSLLPAWLYNDSLVPEMFKKVLEFTM
TPAGIDTAKLYPILMSSGLPREALGQIWASANRTTPGKLTKEELYTVLALIGVAQSGLPA
MSLDILSQFPTPPVPNLPAMAMAMPAVLTHQQPIMPPATSAVMPMASNSLAQPSNSFVAN
FPPVQGSKVEEDDFQDFQEAPKAGDDSFTDFQGETGGTFPAVTSSQSSIPAMLTPVSGSS
SSSTSDKYAVFKHLSVEHPSEPTPPVSDLGDKYSVFRELEQPSDKKPVGEGFADFKSAGA
DDGFTDFKTANSTSPLEPPDQAKTFQPASFPIPFGPSHSLSQSQTHPASLAQPKNPLNMS
DLNLFSSIVPPSTVDSKATSFSNSSSSSAAPSLLLPSTGPKPDDFGDFALFGSSSSSSSA
SEAAASAQRGSAGGGAAVQEDFADFMSFGNSGKQPNESSKESDDFADFQSSKFQEKSLVD
KMAAFKQAKEDSASVKSLDLPSIGGSSVGKDDSEDALSVQLDMKLSDVAGELKHGASDSS
LDLPGLSSHQPPATGFCSLSEVDDLKFDPFGNSGISGLSSCDWSDKDDALSGQDTKAQGV
CVSGLPSSAMLHKKETSFGSSENITLTTLAKVTTFPTEDAGFADFADFSSTQQAPREEED
DDFGDFASTVSEKSDAADPALEASHPEAPDDFGAFQGDKPKFGKSDFLKASAQPKAKSSE
EMIKNELATFDLSVQGSHKRSHSLGDKEICSTPSAPEQQFRDRSNTLSEKPALPVIRDKY
KDLTGEVEESERYAYEWQRCLESALQVISTANNTLNGISSSTVCTEVIQSAQGMEYLLGV
VEVYRVARRVELGIKATAVCSEKLQELLKDISRVWNNLMGFMSLANLSPDESSLDFSSCI
LRHGIKNAKELACGVCLLNVDSRSKKKEENTFGRLLKKALTKDPGTKLTAFNSETDNFKL
TYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagaaggttacacaaacaacccaaactgttgacctgtgtcactgcttcagtaaa
gaatgtttcatgtaccctgttggagggggacttggaccaccacaaggaatgatgcccatg
cagcaacagcagcagcaacaggggtttcccatggtcccagtcatgcagcccaacatgcaa
ggcatgatgggaatgaattttggagcccagatgcctaccggaccgatgcccatgcagggt
ggcatggcgatggggatgcagccaccaggcatgcagttcatgggtcaacctcagttcatg
ggaatgagggccacggggccacagtatcctgccgacctgcagaaacagatggccgaggag
caccaaaagcgcttggaacagcagcagcgcatgctagaggaagatcgcaagaggaggcag
tttgaagaacagaagcagaaactgcgcctcctgagcagcgtcaaacccaaaactggagag
aagagtcgagatgatgcactggaagccataaagggcaatttagatggcttcagcagagat
gcaaagatgcatcccactccatcttctcaatctaagaaaccagactcatcgccatctcac
tcctctgtcccaccacactccctctcccctgcttttgcagaggaggatgatgaatttagt
gactttatacagggccccgttgaggcctcctttcccagttcctccctccctctgtcctcc
tcttcctcaggtgtcagtaggtcacctttagaggcagggcctgggcagcagccctcttcc
agccctctccccttttcccttgctccctctctgcctacactcactgtccctcaccactct
tctgtcatctccagctcccaatctacattccaaggcccatctctggaggagaagctcttc
tcctcgtgcgatctaacagtcgataagaaggctcaggttaactttaagtcccgccaggcc
atgtctgagctggctcccagagctccggtatcggtacacttccagagtagctcaagagct
cacaactgggcccagtgctctgatgacctcagtgctgccttcactgtggagaagactcct
gagcctccaactgcttccccagctcccacagcagcagaagctcagccccatcaggcatca
agtgctagtgcaggtgttggtgtctatccccaacaagaaatgcagtccttgttgccagcc
tggctctacaacgactctcttgttccagagatgttcaagaaggttctggagtttacaatg
actccagcaggcattgacacagccaaactctaccccatcctgatgtcatcgggtctgccc
cgagaggctctgggtcagatctgggcctcagccaaccgtaccacaccgggcaagctgacc
aaggaggagctgtacaccgtgttggcgctgattggagtagcacagagtgggcttccagca
atgagcctggacatcctgagccagttccctacccctccagtgcccaacttgcctgcaatg
gctatggctatgccggctgtcctgacgcaccaacagcccataatgccccctgccacgtct
gcagtcatgcccatggcctccaactcgctggcacaaccttccaacagcttcgtcgccaac
ttccctcctgtccagggatccaaagtggaggaggatgatttccaggactttcaggaggct
ccaaaagctggagatgattcattcacagatttccaaggagagaccggaggaacattcccc
gctgtgacctcctctcaaagcagcattccagccatgctgactccagtgtctggctcttca
tcctcttctacctctgataagtatgcagtgtttaaacacctgtcagtggagcatccttca
gaacccacgcctcctgtctcagatcttggagacaaatacagtgtgttcagagagctggag
cagccatcagacaaaaagccagttggggaaggttttgctgatttcaagtccgctggtgcc
gatgatggcttcaccgactttaaaacggccaacagcacttctccactagagcctccagac
caggccaagacattccaacctgcttcttttccaattcctttcggcccctctcattctctt
tcacaatctcagacccatccagcatctctagcacagcctaagaaccctctaaacatgtca
gacctgaacctcttttcctccatagttcctccttccactgtcgactctaaagccacctct
ttttccaattcctcctcttcctccgcggcaccctcgctgctccttccttccacaggcccc
aaaccagatgactttggtgactttgcactctttggctcctcctcctcatcatcatctgcc
tctgaggcagctgcctcagctcagagaggatctgcaggaggaggagcagcggtacaggag
gactttgctgatttcatgtcgtttggtaactctgggaagcagccgaatgagagcagcaag
gagagtgatgactttgctgactttcagtcatccaaattccaagagaagagcttagtagac
aagatggctgcctttaaacaggccaaggaggactctgcttcggttaagtcgttggacctg
ccgtctattggaggcagcagcgtgggaaaagatgactcggaggacgcactgtctgtgcag
ctggacatgaagttatcagatgtggctggagagctaaaacacggtgcatctgacagttca
ttggacctcccaggcctaagctcccatcagccccccgccacaggtttctgttctctttca
gaggttgacgatctcaagttcgatcctttcgggaactctggcatcagcggtctgagcagc
tgcgactggtccgacaaagacgatgccctgtctggtcaggacactaaagcccagggagtt
tgtgtgtctgggctgccctcctcagccatgcttcacaagaaggagacgtcatttggaagc
tcggagaacatcacacttactacacttgcaaaagtcaccacgttccccactgaggacgca
ggatttgccgacttcgctgatttcagctccacccagcaggcacctagagaggaggaagat
gatgattttggtgactttgccagcacggtttcagaaaaatcagatgcagctgatccggct
cttgaggccagccatcctgaggcgccggacgactttggcgctttccagggtgacaagccc
aagtttggcaaatcggacttcctcaaggctagtgctcagccaaaagcaaaatccagtgag
gagatgatcaagaacgagctcgccacatttgatttgtctgttcaagggtcccacaagcga
agccacagtctaggggacaaggagatctgctccacaccttctgctcctgagcagcagttc
cgtgatcgctccaacaccctgagtgagaaaccggcgctgccagtcatccgggacaagtac
aaagacttaacaggagaggtggaggagagtgagcgctatgcgtacgaatggcagaggtgc
ttggaaagtgctcttcaggtgatctccacagccaacaacacccttaatggtatcagcagt
tccactgtgtgcactgaggtcatccagtcagcacaaggcatggagtacctactaggtgtg
gtggaggtctatcgtgtggccaggcgagtggagctgggcatcaaggccacggccgtgtgc
tcggagaaactgcaggagctgctgaaagacatcagtcgtgtgtggaacaatctcatgggc
ttcatgtctctggccaacctctcacctgatgagagctctctggacttctcctcctgtatc
ctgaggcatggcatcaagaatgcaaaggagctagcctgtggagtgtgtctgctcaacgtg
gattcacgcagcaagaagaaagaagagaacacatttggacgtctgcttaaaaaagcactg
acaaaagacccaggcacaaagttaacggcttttaactcggagacagataacttcaaactg
acgtacggcgggcaccagtaccatgcgagctgtgctaatttctggattaactgtgtagag
cccaagcctcctggcctcatccttcctgacctgctatga
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