Neoarius graeffei (lesser salmon catfish): 132901427
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Entry
132901427 CDS
T10798
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ngra04514
Cell adhesion molecule (CAM) interaction
ngra04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
132901427 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132901427 (ncam1b)
04517 IgSF CAM signaling
132901427 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132901427 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132901427 (ncam1b)
04090 CD molecules [BR:
ngra04090
]
132901427 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
ngra00536
]
132901427 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132901427 (ncam1b)
04091 Lectins [BR:
ngra04091
]
132901427 (ncam1b)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
132901427 (ncam1b)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
NCAM1/2
132901427 (ncam1b)
CD molecules [BR:
ngra04090
]
Proteins
132901427 (ncam1b)
Glycosaminoglycan binding proteins [BR:
ngra00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
132901427 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Others
132901427 (ncam1b)
Lectins [BR:
ngra04091
]
I-type lectins (Siglecs)
132901427 (ncam1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Fn3_ROS1
V-set_CD47
Ig_MYOM1
Ig_PDGFR_d4
Ig_ANOS1
C2-set_2
C2-set_3
C1-set
Motif
Other DBs
NCBI-GeneID:
132901427
NCBI-ProteinID:
XP_060799792
LinkDB
All DBs
Position
17:18466693..18802504
Genome browser
AA seq
1036 aa
AA seq
DB search
MKETRVMAMFLTKQTVLMFLFLGSAASLQVSITPAQGEVSVGESKFFLCEVVGAVKEIDW
FSPNGEKIESNRQDITVIRNDETSSTLTIYNANIATAGTYKCVATDGDQQAEATVNVKIY
QKITFKNATSPQEFTEGDDAVIICDVISSPPPTVMWKHKRAKIEFDKDVRFKILDNNHLQ
IRGIRKVDEGVYTCEGRIMARGEIGFRDIRVIVNVVPTIRVRQAEVNATVDISHSAMLAC
DADGFPDPTVTWTRSLRSEVVLESGDKYSFNEDGSEITIMDVKKLDEGDYTCIARNKAGM
SEEEASLRVFVKPKITYLENQTATEMEEQIRLTCEATGDPTPSITWATGTHVFLEGEQEH
LKRIYQASWTRPEQHKSEDGSVVARSDARVSSLTLKYVQYTDAGQYLCTASNAVGQSSQF
TFLEVHYAPKILGSVAVYTWEGNPANISCEILAHPSDVSIMWLRDGLQLPNANSTNVKIY
TTPTASYLQVNPDSQNDFGSYNCTASNEIGTESKEFILIQADVPSAPNITQVKPYSSTAE
VLFDEPEASGGVPVLKYRAEWRAVGKNNWVQRIYEAREGLSAVTITGLKPNTKYEVKMSA
INGKGEGESSSVAGFKTEPVREPNPPKLEGSLQSKGNALKVKWIKQDDGGSPITQYVIRY
KAREDLTWKDELRVSSTTPHVVLSGLDWNTEYDVTVVAENQQGKSQPGSLNFRTSSEPSA
TPDFIEDGPSLSTGLIVGILILACVVLLLAVDATCCFVNKCGLLMCLCGKPGTSPKGKDV
EAGKAAFVKDDSKEPIVEMRTEDGLTANHDVGGHTEPNETTPLTKPERQTEVASTVVDLP
LSLATNSDTVTDTFDLSQSSPVSESTTLTSSLTAPPSEAKSTPKTSSQPLDTSLLLSDPP
LVDLADSQTSIQSAGQIKSAELDTEKETGGLEAEPVHLGSSCEPRTLINNPQTNGAPPSS
EDLELQIDGGASLTHFPQDGLHSLDTTASTDPSQNEKTFEEEEEIRAEEDELKKVQPEVP
AEPNAILQTNASESKA
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaacccgagtgatggcaatgtttctgaccaagcagacagtcctgatgtttctt
ttccttggcagtgcagcctctctgcaagtgagcatcacgcctgcacaaggagaagtcagc
gttggagagtccaagttctttttgtgtgaagttgttggtgcagtgaaggaaatcgactgg
ttctcaccaaatggcgagaagattgaatccaacaggcaggacatcacagtgatccgcaac
gacgagacatcctctacgctcactatctacaatgctaacattgccactgccggcacgtac
aagtgtgtagccactgacggagaccagcaggctgaagctacagtgaacgtgaagatatac
caaaagattaccttcaagaacgccacatcaccacaagagtttactgagggggacgacgct
gtcatcatatgtgatgtgattagctccccaccacccactgtcatgtggaaacacaaaagg
gcaaaaatcgagtttgacaaagatgttcggttcaagattttggacaacaaccacctgcag
atcagagggatcagaaaggtggatgaaggagtgtacacctgcgagggtcgcattatggct
cgaggcgagatcggcttccgtgatatcagagtcatagtgaacgtcgtccccactatcaga
gtgcgacaagccgaggtgaacgccacggtcgacataagccactctgccatgctggcctgc
gatgcagacggcttccccgaccccacagtcacatggacgcgttctctcaggagcgaggtg
gttctggagagtggggataagtacagcttcaatgaagatggctcagagatcacaataatg
gatgtgaagaagctggatgaaggagattacacctgcattgccaggaacaaagctgggatg
agtgaagaagaagccagcctcagagtttttgtgaaacccaaaatcacgtacttggaaaac
cagaccgctacggagatggaggagcagatcaggttgacgtgcgaagccacaggcgaccca
acacccagcatcacatgggccaccggtacgcacgtctttctcgagggagaacaggagcat
ctaaagaggatttatcaggcatcgtggactcgacccgaacaacacaagagtgaagacggg
agtgtggtggcacgcagtgacgctcgtgtttcctctctgacgctaaagtacgtccagtac
accgacgctggacagtatctctgcacagccagcaatgctgtaggccagagctcccagttc
accttcctagaagtgcactatgcgccaaaaatcctgggctcagtggcagtctacacgtgg
gaggggaatcctgccaacatcagctgcgagattctggctcaccccagtgatgtgtctatc
atgtggctgcgagatggactccagctgcccaatgccaactccaccaacgtcaaaatctat
accacccccactgccagctacctgcaggttaacccggactcccagaacgactttggcagc
tacaactgcacagcttctaatgagatcgggaccgagtccaaagagttcatcctgattcag
gctgatgttccctcggctccaaacatcactcaggtgaaaccctactcaagcacggctgag
gtactgtttgatgaacctgaagcttctggaggagttcccgtgctcaagtaccgtgctgag
tggagagctgtgggcaaaaacaactgggtccagcgcatctatgaagcccgagaggggctg
agtgcagtcacaatcacgggcttaaaaccaaacacgaagtatgaagtcaagatgtctgct
atcaacggcaagggagaaggcgagagcagctctgtcgctggcttcaagacagaacctgtt
cgggagcccaatcctcctaaattggaggggtccctacagtccaaaggcaacgcactaaaa
gtcaagtggatcaagcaggatgatggaggctcgcctatcacacaatatgtcatccggtat
aaagctagagaggatttgacctggaaagatgagctccgtgtctcaagcacaactcctcac
gtcgtcctcagtggcctggactggaacaccgagtatgacgtgacggtggtggccgaaaac
cagcagggcaagtcgcagcctggctcactgaacttccgcacatcctcagaaccctccgcc
acgccagactttattgaggatggcccaagcctgagtacagggctgattgtcgggatcctc
atcctggcgtgtgtggtcctgttgttggccgtggacgccacctgctgcttcgtcaacaag
tgcggcttgctaatgtgtctctgtggcaaacccgggaccagtccaaagggcaaggatgtc
gaggcaggaaaggctgcatttgtgaaggacgactccaaagagcccattgtagaaatgagg
actgaagacgggctcacagccaatcacgacgtagggggacataccgagccaaatgagacc
acgcccctaactaagccagagcgtcaaacagaagtcgcgtctaccgtggtggacttgccc
ctgtctttggccaccaactcagacacagtcactgacacatttgacctgagtcagagcagc
cctgttagtgagagcaccactcttacctccagcctcacggctcctccctctgaggccaaa
tccacccctaaaacctcctcacaacccttagacacttcactcctcttatctgatcctccc
ttagtcgatctggccgattcccagaccagtatccaatcagctggtcagattaaatctgca
gaactcgacactgagaaggaaactggaggtctggaggcagagccagtgcatttaggaagt
tcatgcgagcccagaacgctcattaataatccacagaccaatggcgctcctccctcctca
gaggatctggagctccaaatagatggaggtgcctcgctaacacatttcccacaggatggc
ttgcactctttggatacaactgcctctactgacccatcacagaatgaaaaaaccttcgag
gaggaagaggagattagagctgaggaagacgagctgaagaaggtccagccagaagtaccg
gcagaaccaaatgcaatattgcaaacaaacgcctcggagagtaaggcatga
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