Neoarius graeffei (lesser salmon catfish): 132901528
Help
Entry
132901528 CDS
T10798
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00565
Ether lipid metabolism
ngra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
132901528 (pafah1b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132901528 (pafah1b1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132901528 (pafah1b1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132901528 (pafah1b1a)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132901528 (pafah1b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Nup120_160
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Vps41
WD40_RFWD3
LisH
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
LisH_PAC1
eIF2A
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
Nucleoporin_N
Beta-prop_WDR19_1st
Beta-prop_WDR11_2nd
Pox_A_type_inc
LisH_2
ARMC9_LisH
SutA-RBD
DUF2570
Motif
Other DBs
NCBI-GeneID:
132901528
NCBI-ProteinID:
XP_060799954
LinkDB
All DBs
Position
17:complement(29688389..29739824)
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIGQKRDPKEWIPRPPERYALSGHRSPVTKVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIATCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESASPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTAPYVVTGSVDQALKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcacagagacaacgggatgaactaaatagagcaatagctgattaccttcgt
tccaacggctatgaagaggcatattcagttttcaagaaggaggcggaattagatatgaat
gaagaattggataagaagtatgctggccttttggaaaagaaatggacttcagtcatcaga
ttacagaagaaggtgatggagttagaatcaaaattaaatgaagcaaaagaggagatcact
ttaggaggacctataggacagaaacgagaccccaaagaatggatcccccgcccccctgag
agatatgcccttagtggccacaggagtcctgtcaccaaggtcatcttccacccggttttc
agtgtcatggtgtctgcctcagaggatgctacaataaaggtatgggattatgagaccgga
gactttgaacgtaccctgaaaggccatacagactctgtgcaggacatctcctttgaccag
actggaaagctgctggcttcctgctcagcagacatgactattaaactctgggacttccaa
ggctttgagtgcatcaggaccatgcatgggcatgaccataatgtttcatctgtagctata
atgcccaatggagatcatatagtgtctgcttctagggataaaaccattaaaatgtgggaa
gtggccactgggtactgtgtgaagacgtttactggccacagagagtgggtgcgcatggta
cggcccaaccaagacggctccctgattgccacttgctctaatgaccaaacagtgcgtgtg
tgggtggtggctacaaaggagtgcaaggctgaactgagggaacacgagcacgtagtggag
tgcatctcgtgggctcctgaaagtgccagtccgactatactggaggccacaggctctgag
actaagaagagtgggaaacctggacctttccttctgtctggctccagagacaaaactatc
aaaatgtgggatgtcagcactggcatgtgccttatgacactggttggccatgataactgg
gtgcgtggggtgctcttccatcctggtggaaagttcattgtgagctgtgctgatgacaag
actttgaggatctgggactacaaaaacaagcgttgcatgaaaaccttgagtgcccatgaa
cattttgttacctctctggattttcacaagactgctccgtatgtggtcactgggagtgta
gatcaggcactaaaagtgtgggagtgtcgctga
DBGET
integrated database retrieval system
