Neoarius graeffei (lesser salmon catfish): 132901719
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Entry
132901719 CDS
T10798
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132901719 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
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NCBI-GeneID:
132901719
NCBI-ProteinID:
XP_060800274
LinkDB
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Position
17:44241201..44352058
Genome browser
AA seq
2340 aa
AA seq
DB search
MATALQQVLERNEINRLTKAAQNKLERFLAGKQTELEALRASHESYKADCEQQSASSEKK
TMELQEQLVSNSKECETLKQENGRLADELKKLKSADDNEETLQKGKPPKAKYEIEAENRE
LSRLLEKKSQEMENLTEDLKHLREKLEETSTVKMELQLKLDELQSSEHSIQHREKRMEQE
KELLQNQNTWLTSEVKCKTDELVTVTKKKGIEILQLKCSLESKNDEVARLQEEVNSLNRT
NVNLQKTTEDLMTKLKEEKDQRIAMEEKYRNELNANMRLCTLYKTAAADSDAKNAELNRG
VEELNKLLKKTVETNKSSEKKLAELEGSQGKIEAELQEKLRNLEKEVENANTQLADFKRR
GVPALTEEDLTKLSPTAAIVAKIVKPGMKLMELYNAFVEAQDHLQLEKLENRRINKVLNE
VRSDVERKTSIMKRQREEYENTQKSMNSLSVKLEQAMKEMSKLQEESNEVNKRASLLEKE
NQRARKQIADLSQQVRVLLVELEEARGTKVVRDEVSSAVSSSSEVQGPRQVAFRSVEELQ
QQNQNLLIQIRELEEQHEKNTAEAKMARQAEFEQRLEKAQKELELLKEQRNQQKQVADST
MRQRDMYRILLQTAGVDLPPQGSEGGSESSAPSKPVVTATRSTSNQSVASEVAQAIQTKV
AFKQLNEAFATYKKEKAENDKLLNEQNERLQGQVSELISQKAKLSSQLEFASKRYDMLQE
NLNSYRREISSQREKIQKLSATSQKYEQIIHTMTQDLREATEKLAVAEARCENLRKERDI
LKQVESRLNKEKESILAEQRGQNLLLTNLKSIQLTMERSEADTRQRYANQIMKLEKEIAQ
LKKRIEQEVERRHTVERNQDVQLVEAKKQLAAQNALHQKTKELLKSTEQQVSTLRQQLNS
SEDQNGKQPVKTSSSAEAPGVPEQEVEELRARLQQTEDQNSDLQERLKSAQNNLEEYRTM
VLSLEDYISKDKQALEEARLSIENQLKEAQELNKQLEARMAETEREKQELHEEKLKAVEN
VEKHVKELKHSLTEMQTELQDALQRATSAAAKQQQAIQDSQQQAKLGMEAQNKYERELML
HAADVEALRTAKKQAQEAAKSRKEMEEKVQKATAELQQGCAGWAQQEKSLKEELVKQEQR
VEDFQKQNKMLHEQMEQLSAKMASTVQEQAAREGILNISFNEEGKTQEQILEILRFVRRE
KEIAEARFEVAQVETQRYQQRMEHLEKELKEVQDSLTAERDKLQMTAKAMAQQEDKLKRL
ESLNALTETNKILKEEKTQLEQELQQNRAKMHKLEADMKPMQEKNATLCEQNGMLQVEKR
LLEEDVKRWKNRTQQLVSQQKDSNQEESKKLQTEKEAQVKRIQQLTEEIAKLKSELARAN
ASVSTSQSQGQNLRENVGKLTTERDSLKKELEAKNQDIQEKLKTITQVKKIGRRYKSQYE
ELKAQHDKMVAESAGKPAQVEEVQTEAQQASAQEIQNLRTSLNQAQTRTTELEAQVDSIQ
KTAGEREAEVKSLQEQLAQIQPELTRLRTELQEKTSQEDQLRQQNTEKEEKTKKAILVAK
QRISLLNNAKEKLTRENEELKQQREELEVRMSALKSQYEGRLSRQERELRELREQQERHG
EQRDEPLEQGPSKAQEQQRPSESRQITLKPTPAAERGSASTSEPPTANIKPTPVAGATSK
PSSIPGSKATPRASIRPMITPAPVTTPTPTATVMPTAQTETQEALQPTEAPVEHVTVFGS
GSVRSTSPNVQSTQSIITMQQSQATAFVQPTQQQTSQESAAPMMEAVHSSQMERPSTSTA
VFGTVSASAGSSLQKRIREDELESTTEVTESTQDDLNEPPTAKKICLIHRVGMEEDIGTE
ESNDAEAEAPEGTLEAPDASEDGYNALGVEETLSQSVPLDQVSESQEPTYEHRHDVIVIE
TDSNSEEDGGGAEAGQQYGEEEDEDEDGAMVEGEESNEGSGDVNEPFEGEDTETAEATEP
GTENEESQGASDSTQKHADSQSSGVCAGEASVSTMEPTPAVEPVREVQPSPSTTSSSSLS
SQTPRLPQSPRRPHQTPPPRLNIHPVPELGPPLIQRQSGQTRRPSTSRVPQLTPGMGSMQ
QHFFDDDDRMVPSTPTLVVPHRNDGFAEAIHSPQVAGVPRFRFGPPEDMIPQTSSSHSDL
GQLASQGGLGMYESPLFLAAHDDESGGRSVPTTPLQVAAPVSVFAESQPSDVAEPASQSV
PMVSTSTAAMGGPGEAVPGDDADDVFMAEAESEGTSGEASLESQSELEPAQPSDDASLPS
TSQEPTSSSAPDTSSSQQPRPAERARREGAQPLRRAQLIRRGISYPRGGRGRGFNRGTPF
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggctttgcagcaagtgctggagaggaatgagataaacagactgaccaaagcc
gctcagaacaaactcgagaggtttctggcggggaagcagacggaactggaggcgctcagg
gcaagccatgagagctataaagcggactgcgagcaacagtcggccagcagtgaaaagaaa
acgatggagctgcaggaacagctcgtgtccaatagtaaagaatgtgagacccttaagcag
gagaacggccgacttgccgacgaactcaagaaacttaaatcagctgatgacaatgaagaa
acattacagaagggtaaacctccaaaagccaaatatgagatcgaggcagaaaaccgagag
ctgtcccgcttgctcgagaagaaatcacaagagatggaaaatctcactgaggaccttaag
catctccgtgagaaactggaggaaaccagcacagtgaagatggagcttcagctgaaactg
gatgagctccagtcatctgaacactcgattcagcatcgggagaagcggatggagcaagag
aaagagcttcttcagaaccagaacacatggttgacctctgaggtgaaatgcaaaacggat
gagcttgtcacagtgactaaaaagaagggcatagagatcttacagcttaagtgctctttg
gagagcaaaaacgatgaggtggccaggcttcaggaggaagtcaactcgctcaatagaaca
aatgtgaacctgcagaagacgacagaggacttgatgaccaaactgaaggaggagaaagat
cagcgcattgccatggaggaaaaatatcgcaatgaactgaacgccaacatgagactctgc
actttatataagactgcagcggctgactccgatgccaagaacgcagaactcaatagaggt
gtggaggagctgaacaaactgctaaagaaaacagtggaaactaacaaaagttctgagaag
aaactcgctgagctggaaggctcccagggtaaaatagaagccgagctgcaggagaagctt
agaaatttggagaaagaggtggagaatgccaacacacagcttgcagatttcaagcggaga
ggcgttcctgctctcactgaagaggacctgaccaagttgtctccgactgcagctatagtg
gccaagatcgtgaaacctggcatgaagcttatggagctgtataacgcgtttgtggaggct
caggaccacctacagctggagaagctggagaaccggcgcattaacaaggtgctgaatgag
gtcaggtcagatgtggagcgcaagacgtctataatgaagaggcagagggaggagtatgag
aacacgcagaagtccatgaacagcctcagcgtaaaactagagcaagccatgaaggagatg
agtaaactacaggaagaatctaatgaagtgaataagcgagcttcgttactggagaaggag
aatcagagagcaaggaaacagatagcagacttgtctcagcaggtgcgtgtattactggtg
gagctggaggaggcgcgagggacaaaagttgtgcgggatgaggtgagctctgctgtaagt
agcagctctgaggttcaaggtccacgccaggtagccttccgcagtgtggaggagctccag
cagcaaaaccagaacctcctgatccagatacgagagctggaggaacagcatgagaagaat
acagctgaggcaaagatggctaggcaggcagagttcgagcagagactggagaaggcacag
aaagagttggagctcttgaaggagcagaggaaccagcagaaacaggtggcggactcaacc
atgaggcagagagacatgtaccgcatcctgttgcagacggccggggtggaccttcctcca
cagggctcagagggtgggtctgagtcctctgctcccagtaaacctgtggtcacggccact
cgatcgacttcaaaccagtctgtagcttcagaggtggctcaggccatacagactaaagtg
gctttcaaacagctcaatgaagcgtttgcgacctataagaaggagaaggcggagaatgac
aagcttctcaatgaacagaatgaacgcctgcagggtcaggtgtctgagctgatctctcag
aaagccaaactgtcctctcagctcgaatttgcctccaagaggtatgacatgcttcaggaa
aaccttaacagctacaggagagagatcagctcccagcgggaaaagattcagaagctctcc
gccacttctcagaaatatgagcagatcatccacaccatgacgcaggatctgagggaagcc
actgagaaactcgcagtagctgaggcgcgatgtgagaacctgcgtaaggagcgtgacatt
ttgaagcaggtggagagtcgacttaacaaggagaaggagtccatcttggctgagcagcgt
ggacagaacctgttgctcaccaacctaaagtccatccagctaacgatggagcgctcagag
gcagataccaggcagcgctatgctaaccagattatgaagttggagaaggagatcgcacag
ctaaagaagaggattgaacaggaggtagaacggaggcacactgtggaacggaaccaagat
gttcagctggtcgaggctaagaagcagctggcagctcagaacgctctgcaccagaagacc
aaggaactgctgaagagcactgaacagcaggtttccactctgagacagcagctgaacagc
tccgaggatcagaatggcaaacagcctgttaaaacctcatccagtgctgaagctcctggt
gttcctgagcaggaggtggaggagttgcgtgcacgtctgcagcaaacagaggaccagaac
tcggatctgcaggagcgtctgaagagcgcacagaacaacctagaagaatacaggaccatg
gtgctcagcctggaagactacatcagcaaggacaagcaggcacttgaggaggctcgctta
tccatagagaaccagctaaaggaggcccaggagcttaacaagcagctggaagcccgtatg
gctgagacagaaagagagaagcaggagctgcacgaggagaagctcaaggctgtggagaat
gtggagaaacacgtaaaagagctgaaacatagtctgacagaaatgcagacagagctgcaa
gatgcattacagagagcaacatctgctgcagccaagcagcaacaagccatacaggacagc
cagcagcaggctaagctgggcatggaggcacagaataagtatgaacgggagctcatgcta
catgctgctgatgtggaggctttacggactgctaagaaacaggcccaagaggcagcgaag
agccgtaaggagatggaggagaaggtccaaaaggccactgcagagcttcagcagggttgt
gcgggctgggcgcagcaagagaaaagcctaaaggaggagctggtgaaacaggagcagcgc
gttgaagactttcagaaacagaacaagatgctccatgaacagatggaacagctgagcgct
aaaatggcttccactgttcaggaacaggcagccagagagggcattctaaacatttctttt
aatgaggagggcaaaactcaggagcagatccttgagatcctcaggtttgtgcgtcgggag
aaagagatagccgaggctcggtttgaggttgctcaggtagaaacgcagcgctaccagcag
cgcatggagcacttggagaaagagctgaaggaggtccaggacagtctgacagctgagcga
gacaaactgcagatgactgcaaaagccatggctcagcaggaggataaactaaaaaggctg
gagagcttgaacgctttgactgagaccaacaagatactgaaggaggagaagacccagttg
gagcaggagctgcagcagaaccgggccaagatgcataagctggaggcagacatgaagcct
atgcaggagaaaaatgcaacgctgtgtgagcagaatggcatgctgcaagtcgagaagcga
ctcctcgaggaagatgttaaacggtggaagaatcgcactcagcaactggtgagccagcag
aaagatagcaatcaggaggaaagtaagaagctccaaacagagaaggaggcccaagtcaaa
cgcatccagcagctcactgaggagattgccaaactgaagagtgagctggccagggcgaac
gcatccgtgtccacatcgcagagtcagggtcagaacctgcgagagaatgtggggaaactc
accacagagagagacagtctgaagaaggagctagaggctaagaatcaggacatccaggag
aagctcaaaaccatcacacaggtcaagaagatcggccgccgctacaaaagccagtatgag
gagcttaaggcccagcatgacaagatggttgcagaatcggctggtaaacctgcacaagtg
gaggaagtgcagacggaagcgcagcaggcttcagcacaggagatccagaacctgagaaca
tccctcaaccaggcccagactagaaccacggagctggaggcacaggtggacagcatacaa
aagacagcaggagagcgggaggctgaggtgaagagtctgcaggagcagctcgctcagatt
caaccagagctgacgcgtctccgtacagagcttcaggagaagaccagtcaggaagaccaa
ctaagacaacagaacactgagaaagaagagaagaccaagaaagccattctggtagcaaag
cagaggatcagcctactcaacaatgcaaaagagaagctgactagggagaacgaggagttg
aagcagcagcgagaagagttggaggtgaggatgagtgcactgaagtctcagtatgaaggg
cggcttagccgtcaggaacgagagctgagggagctgcgagagcagcaggaaagacacgga
gaacaacgtgatgagcctctggagcagggaccaagcaaggctcaagagcagcagaggcca
tctgaaagcaggcaaatcaccctgaagcccacacctgctgctgagagaggaagtgctagc
accagtgagccacctacagctaacatcaagcctactcctgtagctggagcaaccagcaaa
ccttcgtccattccaggcagcaaagccacgccaagagcaagcatcagacctatgatcacg
cccgctcctgttaccacaccaactccgaccgccacagtcatgcccacagcacagacagag
acgcaggaggctctgcagccgactgaggcgccggtggaacatgtgaccgtgtttggtagc
ggttctgtgcgttccaccagtccaaacgttcagagcactcagtcgatcatcacaatgcag
cagagccaagctacagcctttgtccagcccacccaacagcagaccagtcaagagtctgca
gcacccatgatggaggcagtgcacagctctcaaatggagagaccgtccacctccactgct
gtgtttggcacagtgtctgcaagcgcaggttcatctctgcagaagcgtatacgagaggat
gagctggaaagcaccactgaggtgactgagagcacacaggatgaccttaacgaaccccct
acagctaagaagatctgtctcatccacagagtcggcatggaggaggatatcggtactgag
gagagtaatgatgcagaagctgaagctcctgaaggtacactggaagccccagatgctagt
gaggacggctataatgcgttaggtgtagaagagaccctgtctcagtctgttcccttggat
caagtgagtgaatctcaagaaccaacctacgaacacaggcacgatgtcatcgtcattgag
acagacagcaacagtgaggaagacgggggtggagcggaggctggacagcagtatggagag
gaggaggatgaagatgaggatggagcaatggtagagggagaagagagtaacgaaggcagt
ggagatgtcaatgagccgtttgagggcgaggacacggagacagctgaggccaccgagcca
ggcactgagaacgaggagagtcagggagcatcggactccacccagaaacacgctgactct
cagagcagtggtgtgtgtgcaggtgaagcaagtgtcagcaccatggagccgactcctgcg
gttgagcctgtgagggaggtgcagccttcccccagcacgacctccagcagctccttgtcc
tctcagaccccccgactgccccagtcaccccgcagaccgcatcagacacccccacctcgc
ctcaacattcacccagtccctgaactcggacccccactcatacagaggcagtcaggtcag
acgagacgcccatcgacgagccgcgtaccccaactcacgcctgggatgggaagcatgcaa
cagcacttctttgatgatgatgatcgtatggttcccagcactccaactctagtggttcct
caccgtaatgatggttttgccgaggctattcattctcctcaggttgctggagtccctcgg
ttccgtttcggtcctccagaggacatgattcctcagacgagctcatctcactctgatctg
ggtcagctggcatcccagggtggtttgggcatgtatgagagcccgctctttctggctgct
catgatgatgagtctggaggcaggagtgttcctaccacccctctacaggtcgcagctcca
gtgagtgtctttgctgagagtcagccctcggatgtggccgagccagcctcacagtctgtc
cccatggtcagcacgtctacggcagccatgggcggacctggagaagctgttcctggggat
gatgctgatgatgtgtttatggcagaagcggaaagtgaaggaacgagcggtgaggcatcg
ttagagagccagtctgaactggagcctgctcagccttctgatgatgcaagcctgccttct
actagccaagaaccaacctccagctctgctccagacaccagcagcagtcagcagcccaga
cctgcagagagagctcgcagagagggtgcacagcccctacgcagagcccagctcatcagg
agaggtataagctacccacgtggtggccgtggccgaggattcaatagaggcacgccgttc
tga
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integrated database retrieval system
