KEGG   Nguyenibacter sp. L1: QN315_00635
Entry
QN315_00635       CDS       T09784                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ngu  Nguyenibacter sp. L1
Pathway
ngu00010  Glycolysis / Gluconeogenesis
ngu00020  Citrate cycle (TCA cycle)
ngu00260  Glycine, serine and threonine metabolism
ngu00280  Valine, leucine and isoleucine degradation
ngu00310  Lysine degradation
ngu00380  Tryptophan metabolism
ngu00620  Pyruvate metabolism
ngu00630  Glyoxylate and dicarboxylate metabolism
ngu00640  Propanoate metabolism
ngu00670  One carbon pool by folate
ngu00785  Lipoic acid metabolism
ngu01100  Metabolic pathways
ngu01110  Biosynthesis of secondary metabolites
ngu01120  Microbial metabolism in diverse environments
ngu01200  Carbon metabolism
ngu01210  2-Oxocarboxylic acid metabolism
ngu01240  Biosynthesis of cofactors
Module
ngu_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ngu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ngu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ngu_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ngu00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    QN315_00635 (lpdA)
   00020 Citrate cycle (TCA cycle)
    QN315_00635 (lpdA)
   00620 Pyruvate metabolism
    QN315_00635 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    QN315_00635 (lpdA)
   00640 Propanoate metabolism
    QN315_00635 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    QN315_00635 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    QN315_00635 (lpdA)
   00310 Lysine degradation
    QN315_00635 (lpdA)
   00380 Tryptophan metabolism
    QN315_00635 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    QN315_00635 (lpdA)
   00670 One carbon pool by folate
    QN315_00635 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ngu04147]
    QN315_00635 (lpdA)
Enzymes [BR:ngu01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     QN315_00635 (lpdA)
Exosome [BR:ngu04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   QN315_00635 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA NAD_binding_8 FAD_binding_2 HI0933_like DAO AlaDh_PNT_C FAD_binding_3 Thi4 2-Hacid_dh_C 3HCDH_N
Other DBs
NCBI-ProteinID: WRH88188
LinkDB
Position
complement(139349..140758)
AA seq 469 aa
MSKTEFDIIVVGGGPGGYVAAIRAAQLGLSTAVVEANHLGGICLNWGCIPTKALLRSSEI
NHLLHHLGEFGFSADNIRFDLDKVVKRSRKVAGQLSAGVAHLLKKNKVAVFDGFGRLDGT
DGTRRKVAITKDGNPVATLTAPHVILATGARARILPGLEPDGRLIWSYREAMVPTAMPKS
LLVVGSGAIGIEFASFYRNMGAEVTVVEVLDRILPVEDEEISALAHKAFAKQGMTLLTSA
KIGAIRKNADSVTLSVEAGGKTQEITVDRVISAVGIVGNVENLGLEGTAVQVDRTHVTID
SHCRTGEPGVYAIGDLAGPPWLAHKASHEGVLCVEAIAGRHVHPIDPANVPGCTYCSPQV
ASVGLTEARAKATGRKVRVGRFPFIGNGKAIAMGEPEGLVKTVFDAETGELLGAHMIGAE
VTEMIQGYAIARTSELTEAELKETIFPHPTISETMHEAVLAAYDGALHI
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgagcaagacagaattcgacatcatcgtcgtcggcggcggccccggcggctatgtcgcc
gcgatccgcgccgcccagctcggcctcagcaccgcggtggtcgaggccaaccatctcggg
ggcatctgcctcaactggggctgcatccccaccaaggcgctgctgcggtcctccgaaatc
aaccatttgctgcatcatctcggcgaattcggcttcagcgccgacaatatccgcttcgac
ctcgacaaggtggtcaagcgctcgcgcaaggtcgcgggccagctttcggccggcgtcgcc
cacctgctcaagaagaacaaggtcgcggtcttcgacgggttcggcaggctggacggcacg
gacggcacgcgccgcaaggtcgcaatcaccaaggacggcaatccggtcgcgactctgacc
gcgccgcacgtcatcctggcgacgggcgcccgcgcccggattctgccggggctcgaaccc
gacggcaggctgatctggtcctatcgcgaggccatggtgcccaccgccatgcccaagagc
ctgctggtggtgggctcgggcgcgatcggcatcgaattcgcctccttctaccgcaacatg
ggcgccgaggtgacggtcgtcgaagtgctcgaccgcatcctgccggtcgaggacgaggag
atcagcgcgctggcccacaaggcattcgccaagcagggcatgaccctcctgaccagcgcc
aagatcggcgcgatccgcaagaacgccgacagcgtcaccctctcggtcgaggccggcggc
aagacgcaggagatcacggtcgaccgcgtcatctcggcggtcggcatcgtcggcaatgtg
gaaaatctcggcctggaaggcaccgcggtacaggtcgaccgcacccatgtcacgatcgac
tcccactgccgcaccggcgagccgggcgtctacgcgatcggcgacctggccggcccgccc
tggctggcgcacaaggccagccacgagggcgtgctgtgcgtcgaggccatagccggccgc
cacgtccacccgatcgacccggccaacgtcccgggctgcacctattgcagcccgcaggtc
gcgtcggtcggcctgaccgaggcccgcgcgaaggcgaccgggcgcaaggtccgcgtcggg
cgcttccccttcatcggcaacggcaaggccatcgcgatgggcgagcccgagggcctggtc
aagaccgtcttcgacgccgagaccggcgaattgctgggcgcgcacatgatcggcgccgaa
gtcacggaaatgatccagggctacgccatcgcccggacctccgaactgaccgaggccgag
ctgaaggaaaccatcttcccgcatccgaccatctccgagacgatgcacgaggccgtgctc
gcggcctatgacggggcgctgcatatctga

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