Nguyenibacter sp. L1: QN315_01635
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Entry
QN315_01635 CDS
T09784
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ngu
Nguyenibacter sp. L1
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngu03016
]
QN315_01635
Enzymes [BR:
ngu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QN315_01635
Transfer RNA biogenesis [BR:
ngu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QN315_01635
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WRH88369
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All DBs
Position
368826..369464
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AA seq
212 aa
AA seq
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MPSMTTTSPSIQLHRGDLPDDVSFQGTIAVDTEAMGLNPHRDRLCLVQISAGDGNAHLVQ
IVPGTPSPNLARLMADRTVTKLMHFARFDVAILQHALGVTVAPVICTKIASKLVRTFTDR
HGLAHLCRELLGVDLSKQQQTSDWGAAVLTPEQQAYAASDVLHLHALWAKLEALLHREGR
RALAQACYDFLPARARLDLLGYEEPDIFAHRA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgccttctatgaccaccacgtctccttcgatccagttgcatcgcggcgacctgccggac
gatgtctccttccaagggacgatcgcggtggataccgaggccatggggctgaacccgcat
cgcgaccggctgtgcctggtgcagatttccgcgggcgacggcaacgcgcacctggtgcag
atcgtgcctggcacgcccagccccaacctggcgcggctgatggcggaccgcacggtcacc
aagctgatgcatttcgcacggttcgacgtggcgatcctgcagcacgcgctgggcgtgacc
gtggcgccggtgatctgcaccaagatcgcctccaagctggtgcgcaccttcaccgaccgg
cacgggctggcgcatctgtgccgcgaattgctgggcgtggacctgagcaagcagcagcag
acctcggactggggcgcggccgtgctgacgcccgagcagcaggcctatgccgcgtcggac
gtgctgcacctgcacgcgctgtgggcgaagctggaggcgctgctgcaccgcgagggacgg
cgcgcgctggcccaggcctgctatgatttcctgcccgcgcgggcgcggctggacctgctg
ggctatgaggagccggacatcttcgcccaccgggcatga
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