Nguyenibacter sp. L1: QN315_02370
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Entry
QN315_02370 CDS
T09784
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
ngu
Nguyenibacter sp. L1
Pathway
ngu02024
Quorum sensing
ngu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN315_02370 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QN315_02370 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngu03019
]
QN315_02370 (hfq)
03036 Chromosome and associated proteins [BR:
ngu03036
]
QN315_02370 (hfq)
Messenger RNA biogenesis [BR:
ngu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QN315_02370 (hfq)
Chromosome and associated proteins [BR:
ngu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
QN315_02370 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
WRH88500
LinkDB
All DBs
Position
complement(523287..523583)
Genome browser
AA seq
98 aa
AA seq
DB search
MAKEATQNVQDVFLNHVRRSKTPVTVFLVNGVKLQGIITWFDNFSVLLRRDGHTQLVYKH
AISTVMPATPVVLFEPSRSEGAATELADKDLAGDADLL
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagaagcaacacagaacgttcaggacgtttttctcaaccatgtccgacgctcc
aagacgccggtgacggtgttcctggtcaacggcgtgaagctgcagggcatcattacctgg
ttcgacaatttctcggtgctgctgcggcgcgacgggcatacgcaactggtctacaagcat
gcgatcagcacggtgatgccggcgaccccggtcgtgctgttcgagccctcgcgcagcgag
ggggcggcgacggagctggcggacaaagatctggcgggggatgccgatctcctctga
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