KEGG   Nguyenibacter sp. L1: QN315_02370
Entry
QN315_02370       CDS       T09784                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ngu  Nguyenibacter sp. L1
Pathway
ngu02024  Quorum sensing
ngu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ngu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    QN315_02370 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    QN315_02370 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngu03019]
    QN315_02370 (hfq)
   03036 Chromosome and associated proteins [BR:ngu03036]
    QN315_02370 (hfq)
Messenger RNA biogenesis [BR:ngu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     QN315_02370 (hfq)
Chromosome and associated proteins [BR:ngu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    QN315_02370 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: WRH88500
LinkDB
Position
complement(523287..523583)
AA seq 98 aa
MAKEATQNVQDVFLNHVRRSKTPVTVFLVNGVKLQGIITWFDNFSVLLRRDGHTQLVYKH
AISTVMPATPVVLFEPSRSEGAATELADKDLAGDADLL
NT seq 297 nt   +upstreamnt  +downstreamnt
gtggcaaaagaagcaacacagaacgttcaggacgtttttctcaaccatgtccgacgctcc
aagacgccggtgacggtgttcctggtcaacggcgtgaagctgcagggcatcattacctgg
ttcgacaatttctcggtgctgctgcggcgcgacgggcatacgcaactggtctacaagcat
gcgatcagcacggtgatgccggcgaccccggtcgtgctgttcgagccctcgcgcagcgag
ggggcggcgacggagctggcggacaaagatctggcgggggatgccgatctcctctga

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