Nguyenibacter sp. L1: QN315_03025
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Entry
QN315_03025 CDS
T09784
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ngu
Nguyenibacter sp. L1
Pathway
ngu03030
DNA replication
ngu03430
Mismatch repair
ngu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QN315_03025 (holA)
03430 Mismatch repair
QN315_03025 (holA)
03440 Homologous recombination
QN315_03025 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngu03032
]
QN315_03025 (holA)
03400 DNA repair and recombination proteins [BR:
ngu03400
]
QN315_03025 (holA)
Enzymes [BR:
ngu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QN315_03025 (holA)
DNA replication proteins [BR:
ngu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QN315_03025 (holA)
DNA repair and recombination proteins [BR:
ngu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QN315_03025 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF6238
Motif
Other DBs
NCBI-ProteinID:
WRH88616
LinkDB
All DBs
Position
678144..679160
Genome browser
AA seq
338 aa
AA seq
DB search
MKIDARSVARILREPGALRAILLHGDDTGLIRERARQAATAIAPQLDDPFRVVILDRDAP
ERLEEEIFALSLTGGRRVIWIREGGDSLANPLKTSLSQSSDTLVVIEAPGLAARSRLRSL
IEAHAQCAAIGCYPEEGRALEASVRQMLAEEDIRINPDALAWFASQLGPDRAATRGEVEK
LVLYAGRGGQLSLDDVRACIGDAAGVSLEDAAFAATVGDRAGADLAIERALAEGTSPIAI
ARALLSHLHRLRRARIAMDGGQSRADAMRALRPPVFFKRTEAFGQALSLWTTDRLMEAAM
QTQALERDCKQTGAPDLTLCRRHIARLASTARLPRRGR
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgacgcccgctcggtcgcgcgtatcctgcgtgaacctggtgcattgcgtgcc
atcctgctgcacggcgacgacaccggcctgatccgcgaacgcgcccgccaggcggcgacg
gctatcgctccacagttggacgacccgttccgtgtcgttattctagaccgcgatgcgcca
gaaaggcttgaagaggaaatcttcgccctgtctctgaccggcggccgccgagtcatctgg
attcgcgaaggcggcgattccctagccaacccactgaaaaccagcctgtcccagtcgtcg
gatacgctagtcgtcatagaagcccccggcctggctgcacgctcacgtctgcgcagcctg
atcgaagcccatgcgcaatgtgccgcgatcggctgctatcccgaggaaggacgcgcactg
gaagcgtcagtccgccagatgctggccgaggaagatatccgcatcaatcccgacgcgctt
gcatggtttgccagtcaactgggccccgaccgcgccgccacacggggagaggtcgagaag
ttggtgctctatgccggccgaggcggccagctttcactggacgatgttcgggcctgcatc
ggcgacgcagcgggagtctcacttgaggacgcagccttcgccgccactgtgggcgatcgg
gccggggccgatctagcgatcgagcgtgcattggccgagggaacgagtccgattgcgatt
gcacgtgctttactatcgcacctgcaccgactgcgccgcgcccgcattgccatggatggc
ggtcaaagccgcgcggacgccatgcgcgctctgcgtcctcccgtctttttcaagcgcacc
gaagcgtttggccaggccctatcattgtggactaccgaccggctgatggaggccgccatg
cagacccaagcccttgagcgagactgcaagcaaaccggcgcaccggatctgactctctgc
cgccgccatatcgcccgtctggcgtcgaccgccaggctgccgcgccgaggacgctaa
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