Nguyenibacter sp. L1: QN315_06250
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Entry
QN315_06250 CDS
T09784
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ngu
Nguyenibacter sp. L1
Pathway
ngu00541
Biosynthesis of various nucleotide sugars
ngu01100
Metabolic pathways
ngu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QN315_06250 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ngu01005
]
QN315_06250 (rfaD)
Enzymes [BR:
ngu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
QN315_06250 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ngu01005
]
Core region
QN315_06250 (rfaD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
WRH89851
LinkDB
All DBs
Position
complement(1387395..1388375)
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AA seq
326 aa
AA seq
DB search
MIIITGGAGFIGSCLHAALRARGEETVIVDWLGAEGKWRNIARHAPERLLAPEALDDFLV
DQPAVTAVFHLGAISETTARDGDLIWRTNIDLSARLWAWCVRHGARFIYASSAATYGAAD
RSELFSDDPAMLDSLRPLNLYGWSKHVFDRQVMARLARGEAAPPQWAGLKFFNVFGPNEY
HKGKMISVVKVKYDEVSQGLPARLFRSDVQGLADGAQARDFIWVGDVVDVMLWLLDNPRV
SGLFNCGTGVARTYLDLAHAVCDATGAPRQVEFIDMPANLRGQYQSYTCADMTRLRAAGY
GRPFTTLEDGVRRYVRDYLAAPDPYL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcatcaccggtggagccgggttcatcggctcatgtctgcatgcggcgcttcgg
gcgcggggcgaggagacggtcatcgtcgactggcttggtgcggaagggaaatggcgcaat
atcgcgcgccatgcccccgagcggctgcttgcgcccgaggctctggacgatttcctggtc
gaccagccggccgtgacggctgtgttccatttgggcgcgattagcgagacgaccgcgcgc
gacggagacctgatctggcgcaccaatattgacctgtcggcgcgcttatgggcgtggtgt
gtgcggcacggtgcgcgcttcatctatgcgtcatcggctgcgacctatggcgccgccgac
cggtcggaactattttccgacgatcccgcaatgctggactccctgcggccgctgaacctg
tatggctggtcaaagcatgtatttgatcggcaggtgatggcgcgactggcccggggcgag
gccgcgccgccgcaatgggcggggctgaaattcttcaacgtcttcggcccgaacgaatac
cataagggcaagatgatctcggtcgtgaaggtgaaatatgacgaggtcagtcagggcttg
ccggcgcggctgttccggtcagatgtgcagggattggcggatggagcgcaggcgcgggac
ttcatctgggtcggcgacgtggtggacgtgatgctgtggctgctggacaacccgcgggtc
agcgggctgttcaattgcgggaccggggtggcgcggacctatctggacctagcccatgcg
gtgtgcgacgccacgggtgcgccaaggcaagtggaattcatcgacatgcccgccaatttg
cggggacagtaccaatcctatacctgcgcggacatgacgcgcctgcgggcggcgggctat
ggacggccgttcacgacgctggaagacggggtccgccggtacgtgcgggattacttggcc
gcgcccgacccatatctgtga
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