Nguyenibacter sp. L1: QN315_10400
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Entry
QN315_10400 CDS
T09784
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ngu
Nguyenibacter sp. L1
Pathway
ngu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QN315_10400 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngu03019
]
QN315_10400 (pnp)
03016 Transfer RNA biogenesis [BR:
ngu03016
]
QN315_10400 (pnp)
Enzymes [BR:
ngu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QN315_10400 (pnp)
Messenger RNA biogenesis [BR:
ngu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QN315_10400 (pnp)
Transfer RNA biogenesis [BR:
ngu03016
]
Prokaryotic type
tRNA degradation factors
QN315_10400 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WRH86453
LinkDB
All DBs
Position
complement(2310308..2312449)
Genome browser
AA seq
713 aa
AA seq
DB search
MFNYYRKEIDWGGRPLVLETGKIARQADGAVVVTYGDTVVLCTAVGAKSVKPGQDFFPLT
VNYQEKAFAAGKIPGGFFKREGRPSEIEVLNSRLIDRPIRPLFPDNFRNEVQVVATVLSH
DLENDPAIAALVGCSAALTLSGIPFFGPVAACRVGHLNGEYVLNPTLAEMKDSALDLVVA
GTSEGVLMVESEAGELSEEVMLGAVTFGHAAFQPVIDAIIALAEHAAKAPWDLAEPTAEE
IALQQRVDALGRAAIAAAYQERVKQERYKKVGAAKEAVLAGLAAEGLNADAAKPMLKELE
ADVVRSAVLDTGLRIDGRDLKTVRPIVSEVGILPRAHGSALFTRGETQALVVATLGTAQD
EQVIDALEGEYRTNFMLHYNFPPYSVGECGRMGSPGRREIGHGKLAWRAVHPLLPGKDAF
PYTMRIVSEITESNGSSSMATVCGTSLALMDAGVPLRRPVAGIAMGLIKEDRGFAVLSDI
LGDEDHLGDMDFKVAGTELGVTSLQMDIKITSITPEIMKIALEQAREGRLHILGEMAKAL
TEGRADVSASAPKITTISVPKEKIRDVIGQGGKVIREIVEYSGAKIDINDDGTIMIAATS
EDQAAKAIERIRGIVAEPELGAIYTGKVVKTADFGAFVNFLGARDGLVHISELSQGRVAK
TTDVVNQGDVVKVKVLGFDDRGKVKLSMRVVDQETGADITETVGAKPGRPPAR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcaattattatcgcaaggaaatcgactggggcggacgtccgctggtgctggagacg
ggcaagatcgcccgccaggccgacggcgccgtcgtcgtgacctacggcgacacggtggtg
ctgtgcaccgccgtcggcgccaagagcgtcaagccggggcaggatttcttcccgctgacc
gtcaattaccaggaaaaggcgttcgccgccggcaagatcccgggcggtttcttcaagcgc
gaaggccgtccgtccgagatcgaggtgctgaattcgcgcctgatcgaccgtccgatccgc
ccgctgttccccgacaatttccgcaacgaggtccaggtcgtcgccaccgtgctgagccac
gacctggagaatgacccggccatcgccgcgctggtcggctgctcggcggcgctgaccctg
tcgggcattccgttcttcggccccgtcgcggcctgccgcgtcggccatctgaacggcgaa
tatgtgctgaacccgaccctggccgaaatgaaggacagcgcgctggacctggtggtcgcc
gggacgtcggaaggcgtgctgatggtcgagtccgaggcgggcgagctgagcgaagaggtg
atgctgggcgccgtgaccttcggtcatgcggccttccagccggtgatcgacgccatcatc
gcgctggccgagcacgcggcgaaggcgccgtgggacctggccgagccgacggccgaggaa
atcgcgctgcagcagcgggtcgacgcgctgggccgcgcggcgatcgccgccgcctatcag
gagcgcgtgaagcaggagcgctacaagaaggtcggcgccgcgaaggaggccgtgctggcc
ggcctggcggcggaaggcctgaacgccgacgcggccaagccgatgctgaaggagctggaa
gccgacgtggtgcgcagcgccgtgctggataccggcctgcgcatcgacgggcgcgacctg
aagacggtccgcccgatcgtgtccgaggtcggcatcctgccgcgcgcccatggctcggcc
ctgttcacccgcggcgagacccaggccctggtcgtcgccacgctgggcaccgcccaggac
gagcaggtgatcgacgcgctggaaggcgaataccgcaccaatttcatgctgcactataat
ttcccgccttattcggtgggcgagtgcggccgcatgggctcgcccggccggcgcgagatc
gggcacggcaagctggcctggcgcgcggtgcatccgctgctgcccggcaaggatgccttc
ccctacacgatgcgcatcgtctccgagatcaccgagagcaacgggtcgtcctcgatggcc
acggtgtgcggcacctcgctggcgctgatggatgccggcgtgccgctgcgccgcccggtg
gccggcatcgccatggggctgatcaaggaagatcgcggcttcgccgtgctgtccgacatc
ctgggggatgaggatcacctgggcgacatggacttcaaggtcgcgggcaccgagctgggc
gtcacctccctgcagatggacatcaagatcacctcgatcacgcccgagatcatgaagatc
gcgctggaacaggcgcgcgagggccggctgcacatcctgggcgagatggccaaggcgctg
accgaaggccgcgccgacgtctcggcctcggcgccgaagatcaccacgatctccgtgccc
aaggaaaagatccgcgacgtgatcggccagggcggaaaggtgatccgcgagatcgttgaa
tattcgggtgcgaagatcgacatcaacgatgacggcacgatcatgatcgccgccacgtcc
gaagatcaggccgccaaggcgatcgagcggatccgcggcatcgtggccgagcccgaactg
ggggcgatctataccggcaaggtggtcaagaccgccgatttcggcgcgttcgtgaacttc
ctgggcgcgcgcgacggcctggtccatatttcggaactgtcgcagggccgggtggcgaag
accaccgacgtggtcaaccagggcgacgtggtgaaggtgaaggtcctgggcttcgacgat
cgcggcaaggtgaagctgtcgatgcgggtggtcgatcaggaaaccggcgccgacatcacc
gagaccgtgggcgccaagccgggccgtccgccggcacgctga
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