Nguyenibacter sp. L1: QN315_10410
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Entry
QN315_10410 CDS
T09784
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ngu
Nguyenibacter sp. L1
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngu03016
]
QN315_10410 (truB)
Enzymes [BR:
ngu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QN315_10410 (truB)
Transfer RNA biogenesis [BR:
ngu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QN315_10410 (truB)
Prokaryotic type
QN315_10410 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WRH86455
LinkDB
All DBs
Position
complement(2312993..2313913)
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AA seq
306 aa
AA seq
DB search
MRRKRGRAIDGWLVIDKPSGMTSTEIVNRVKRLFDAQKAGHGGTLDPLATGLLPVAFGAA
TKTVPYIMDGTKRYQFTLRLGEARDSDDADGVVTATSDVRPTDAQFRDALPAFRGDIMQV
PPVFSAIKVAGERAYDMARDGRAPDLPPRPARVDRFELVARPDADTAIFEVESGKGVYMR
SLARDIARACGTVGHVAALRRLRVGPFSEADAIKLDKIATSDDNAPASPDLLLPVATALA
DIPALALTHEEADALSHGRAISLLDLMGRIPDAVDPAGGIARGMDGKRVIGLCRLEDGWL
RPDRML
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcaagcgcggacgcgcgatcgatggctggctggtgatcgacaaaccgtcgggc
atgacctcgaccgaaatcgtgaaccgggtgaagcgcctgttcgacgcccagaaggcgggg
cacggcggcacgctggacccgctggcgaccgggctgctgcccgtggccttcggcgcggcc
accaagacggtgccctatatcatggacgggaccaagcgctaccagttcaccctgcggctg
ggcgaagcgcgggattccgacgatgccgacggcgtggtgaccgcgacctcggacgtgcgc
cccaccgacgcgcagttccgcgacgccctgccggcctttcgcggcgacatcatgcaggtg
ccgccggtcttctcggccatcaaggtggcgggagagcgcgcctacgacatggcgcgcgac
gggcgcgcgccggatctgccgccccggccggccagggtcgaccggttcgagctggtggcc
cggccggacgccgacaccgcgatcttcgaggtggagtccggcaagggcgtctatatgcgc
tcgctggcgcgcgacatcgcccgggcctgcggcacggtgggccacgtggcggccctgcgc
cggctgcgggtcggtccattttccgaggcggatgcaattaagctggacaaaatagcgaca
agcgacgacaacgcgcctgcttcaccggatctgctgcttccggtcgcgaccgcgctggcc
gacatcccggcgctggccctgacccacgaagaagcggatgccctgtcacacgggcgggcg
atcagcctgctcgacctgatggggcggattccggacgccgtcgatcccgcgggcgggatc
gcgcggggaatggacgggaagcgggtgatcgggctctgccggctggaggatggctggctg
cgcccggaccgtatgctttaa
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