Nguyenibacter sp. L1: QN315_18535
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Entry
QN315_18535 CDS
T09784
Name
(GenBank) RsmD family RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ngu
Nguyenibacter sp. L1
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngu03009
]
QN315_18535
Enzymes [BR:
ngu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
QN315_18535
Ribosome biogenesis [BR:
ngu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
QN315_18535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRAM
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
WRH87911
LinkDB
All DBs
Position
complement(4081775..4083055)
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AA seq
426 aa
AA seq
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MTIETDITQLGADGDGIAHAPDGGRLFIPGALPGERVLADMQDPRAARLVRVLRPSPDRV
DPPCPLFGLCGGCALQHFARPATLAWKEALVRHALERAGFAAPPAPATHQSPPGSRRRID
LAVRRLPQGVSIGLHARRGDVIDLTACPVLDPALFALIAGLRGLMQSLGALRRTGDAQVN
LLDSGPDLLLATDGPLAAADRAKLADFARAHHVPRIAWRPAGSTQSPETASQTAPVRHDL
SGVAVTPPPGAFLQPTRQGEAAIVAAILAGLPRRLGRKDTIIELYAGCGTLSFALARHAK
VLAFEGHPDAYAALHRAAAGTRVIAERRDLNRQPVMAQHLAQASAVVLDPPYAGAGAQMA
QIIAGRPPCIIYVSCNPQALARDVAGLKEAGYTLDGLTVIDQFLWSTETEAVCVFTAPRR
PRRPGR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgagaccgacatcacccaactcggggccgacggcgacggcatcgcccacgcc
cctgatggcggccgcctgttcatccccggcgccttgccgggcgaacgggtgctggccgac
atgcaggacccgcgcgcggcccggctggtccgggtgctgcgccccagcccggaccgggtc
gatccgccctgtccgctcttcggcctgtgcggcggctgcgcgctccagcatttcgcacgt
cccgccaccctggcatggaaagaggctctggtgcggcacgcgctggaacgcgccggcttc
gccgccccgcccgcgcccgcgacgcaccagagcccgccgggcagccggcggcgcatcgac
ctggcggtccggcgcctgccgcagggtgtgtcgatcggcctgcacgcccggcgcggcgac
gtgatcgacctgacggcctgcccggtgctggacccggcgctgttcgcgctgatcgccgga
ctgcgcggcctcatgcaatcgctgggcgcgctgcgccgcaccggcgacgcacaggtcaac
ctgctcgattccggccccgacctgctgctcgccaccgatggcccgctggcggccgccgac
cgggccaagctggccgatttcgcgcgcgcgcaccatgtgccgcgcatcgcctggcgcccc
gccggcagtacccagtccccggaaaccgcctcccagacggcgcccgtccgccacgatctg
tccggagttgccgtcaccccgccgcccggcgccttcctccagccgacccgccagggcgag
gccgcgatcgtcgccgccatcctggccggactgccccggcgcctggggcgcaaggacacg
atcatcgaactttatgccggctgcggcaccctgtccttcgcgctcgcccggcacgccaag
gtcctggcgttcgagggccatcccgacgcgtacgccgccctgcaccgcgccgcggccggc
acgcgggtcatcgccgaacggcgcgacctgaaccgccaaccggtcatggcgcagcacctg
gcccaggccagcgccgtggtgctggacccgccctatgccggggccggcgcgcagatggcg
cagatcatcgccgggcgcccgccctgcatcatctatgtcagttgcaatccccaggccctg
gcccgcgacgtcgcgggcctcaaggaggcgggctacacgctggacggcctcacggtgatc
gaccagttcctctggtccaccgaaaccgaggccgtgtgcgtcttcaccgctcccagacgc
ccccggcgcccgggccggtaa
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