Nguyenibacter sp. L1: QN315_19520
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Entry
QN315_19520 CDS
T09784
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ngu
Nguyenibacter sp. L1
Pathway
ngu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QN315_19520 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngu03400
]
QN315_19520 (mutM)
Enzymes [BR:
ngu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QN315_19520 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QN315_19520 (mutM)
DNA repair and recombination proteins [BR:
ngu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QN315_19520 (mutM)
BRITE hierarchy
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
WRH88079
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All DBs
Position
4292772..4293665
Genome browser
AA seq
297 aa
AA seq
DB search
MPELPEVETVMRGMRSHLDGRRIAQVAVRRADLRFPFPADLAARLRGARIVELARRAKYI
LLRLDSGQTMLLHLGMSGRVLLTPPGAANGFQDRHEHLAVTMEDGTHFGLVDPRRFGAVD
LMPTSAETTHRLLAHLGPEPLGNDFSQHWLHQAIGRRRTTIKAALLDQGVVAGLGNIYVS
EALYRAAIHPARLACSLTAREEAALVRGIRAVLRDAIAAGGSSLRDYVQTDGTLGYFQHE
WRVYGRAGTGCPDCPGAPVCGGVVRLEQAGRSSYFCPMRQRPPDGSGRAAHAHEDVS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccctgaagtcgaaacagtgatgcgcgggatgcgatcgcatctcgacggc
aggcggatcgcccaggtggcggtgcgccgcgccgacctgcgctttccctttcccgccgac
ctcgcggcccgcctgcgcggcgccagaatcgtcgaactggcgcggcgggcgaaatatatc
ctgctgcggctggatagcggacagaccatgctgctgcatctcggcatgtcgggccgggtg
ctgctgacgccgccgggcgcagccaacggcttccaggaccgtcacgagcatcttgccgtg
acgatggaggacggcacccatttcggcttggtcgatcccaggcgcttcggcgcggtggac
ctgatgccgacatcggccgagaccacccatcgcctgctggcgcatctggggcccgaaccg
ctgggcaacgatttctcgcagcactggctgcaccaggcgatcgggcggcggcggaccacg
atcaaggccgcgctgctggaccagggagtcgtggcggggctggggaacatctacgtctcc
gaggccctgtaccgcgccgcgatccaccccgcccgcctggcctgttccctgaccgcgcgc
gaggaagcggccctggtgcgggggatccgcgccgtgctgcgcgatgcgatcgccgccggc
gggtcgtccctgcgcgactatgtgcagacggacggcacgctgggctatttccagcatgaa
tggcgggtctatggccgggcgggcaccggctgtccggactgtcccggcgcccccgtctgc
ggcggcgtggtccgtctggagcaggccggacggtccagctatttctgtcccatgcgccag
cgcccgcccgacggaagcgggcgcgcggcacatgcgcatgaagacgtgtcttga
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integrated database retrieval system