Nocardiopsis gilva: CDO52_01930
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Entry
CDO52_01930 CDS
T05022
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDO52_01930 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngv03032
]
CDO52_01930 (dnaB)
Enzymes [BR:
ngv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CDO52_01930 (dnaB)
DNA replication proteins [BR:
ngv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CDO52_01930 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
Hom_end
LAGLIDADG_3
Motif
Other DBs
NCBI-ProteinID:
ASU81717
UniProt:
A0A223S0U7
LinkDB
All DBs
Position
complement(360548..363157)
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AA seq
869 aa
AA seq
DB search
MSVADHTPEDGSGFDRTPPHDIKAEQSVLGGMMLSKEAITQVVEIVRSHDFYRPAHQTIF
DSIVDLFARGEPVDAITVNAELTKRGEAARVGGAVYLHTLTESIPTAANAGYYANIVSDR
AILRRLVEVGTRIAQIGYVGDGEVDDLVDHAQAEIYKVAEKRTGDDYLPLSDIMPGALDE
IEAISAHDGSMTGVPTGFTDFDQLTNGLHAGQMVIIAARPAVGKALALDTPLPTPDGWTT
MGEVEVGSELIATDGSPTRVVAATEVMKGRPCYEITFDDGTVAVADAEHQWLTDTRASRR
SAHCAATGYNRYRNQRTFPEVRTTEEIARTLRCETADGRLNHSVVNAEAMDLPKRELLVP
PYFLGAWLGDGASSTSRITTVDPEILRNIEDEGLITKPVGATKHSFGVFLPQEDSPSVQR
SCVVCGTPFTPKLPHVRSCGQSCGGEARFVSDPVPQASCTDCGRPCFAQSRCRDCIDDHG
SLQALLHKIGVLDNKHIPADYLRASVQQRKALLAGLLDTDGTVNANGSIQFAVTNRRLAY
DVRELAHSLGYRSGMSTKQVKGRTADSSTCYTITFGSHENVFGISRKAKAHHERSEGRNY
CRIGSRFITSVRAVDSVPVRCVQIDHPSHLYLATRSMIPTHNSTLALDFARAASIKNQLT
SVFFSLEMGRNEIVMRLLSAEARVPLHTMRSGLMTDDDWARLARRMGEVASAPLFIDDSP
NMSMMEIRAKCRRLKQQHDLKLIIVDYLQLMSASGRVESRQQEVSEMSRSLKLLAKELEV
PVIALSQLNRGPEQRTDKKPQVSDLRESGSIEQDADMVILLYREDVHDKESPRAGEADLI
VAKHRNGPTATVTVAFQGHYSRFVDMAPG
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcgctgatcatacgccggaggacggcagcggtttcgaccgcacccctccgcat
gacatcaaggcggagcagagcgtgctcggcggcatgatgctctccaaggaagccatcacc
caggtcgtggagatcgtccgctcgcacgacttctaccgcccggcccaccagaccatcttc
gactccatcgtcgacctcttcgcccgcggcgagccggtcgacgccatcaccgtcaacgcc
gaactcaccaagcgcggcgaggcggcccgcgtcggcggcgccgtgtacctgcacactctg
accgagtccatccccaccgcggccaacgccggctactacgccaacatcgtctccgaccgc
gcgatcctgcgccgcctggtcgaggtgggcacccgcatcgcccagatcggctatgtgggc
gacggcgaggtcgacgacctggtcgaccacgcccaggccgagatctacaaggtcgccgag
aagcgcacgggcgacgactacctgcccctcagcgacatcatgccgggcgccctcgacgag
atcgaggccatctccgcccacgacggctcgatgaccggtgtccccaccggcttcaccgac
ttcgaccaattgaccaacggtctccacgcggggcaaatggtcatcatcgcggcacgtccg
gccgttggtaaggccctggctctggacacgccgctccccacgcccgacgggtggacgacg
atgggggaggtcgaggttgggagcgagttgatcgcgaccgacggctcaccgacgcgcgtg
gtcgccgccaccgaggtgatgaagggccgtccgtgctacgagatcaccttcgacgacgga
accgtggccgtcgccgatgccgagcatcagtggctgactgacactcgtgcgtctcgtaga
tccgcgcattgcgccgcgaccggatacaaccggtatcgcaaccagcgcaccttccccgag
gtccggacgaccgaggagatcgcacggactctgcggtgcgaaaccgccgacggtcggctg
aaccactccgtggtcaacgccgaagccatggacctccccaagcgggagctccttgtcccg
ccctacttccttggcgcgtggctcggcgacggggcttcctcaacgtctcgcatcaccacc
gtggacccggaaatcctccggaacatcgaggacgagggcctgatcaccaagcccgtgggg
gcgacaaagcactccttcggagtcttcctcccccaagaggacagtccgtcagtccagcgg
agctgcgtggtctgcggcacgcccttcacgccgaagcttccgcacgtgcggagctgtggc
cagtcctgcggcggcgaggcccgattcgtctcggatcccgtcccacaggcgtcctgcacc
gattgcggacgtccgtgcttcgcgcagtcccggtgccgtgactgcatcgatgatcacggg
agcctgcaggcgctgctccacaagatcggggtcttggacaacaagcacattcccgccgac
tatctgcgagcatcggtccagcagcgcaaggcgcttctggccggactcctcgacacggac
ggaacggtcaacgcgaacggatccattcagttcgccgtcacgaataggcgtctggcctac
gacgttcgggaactggcccacagcctgggctaccggtcggggatgtcaacgaagcaggtc
aagggtcgtactgcggattcctcgacctgctacacgatcaccttcggctcgcatgagaac
gtcttcgggatcagccgcaaggcgaaggcccatcacgagcggagcgaaggccggaactac
tgcaggatcggttcccgtttcatcaccagcgtccgtgcggtggacagcgtgcccgtccgc
tgcgttcagatcgaccatccgagccacctgtacctcgccacccggtcgatgatcccgacc
cacaactcgaccctggccttggacttcgcccgggcggcgtccatcaagaaccagttgacc
tcggtcttcttcagcctggagatgggccgcaacgagatcgtcatgcggttgctctcggcc
gaggcgcgggtgccgctgcacaccatgcgctcggggctgatgaccgacgacgactgggcg
cggctggcccgccggatgggcgaggtcgcgagcgcacccctgttcatcgacgattcgccg
aacatgtcgatgatggagatccgggccaagtgccgccgcctcaagcaacagcacgacctc
aagctcatcatcgtcgactacctgcagctgatgagtgcctccggccgggtggagagccgc
cagcaggaggtctcggagatgtcccggtcgctgaagctgctggccaaggagctcgaggta
ccggtcatcgcgttgtcccagctgaaccgtggtccggagcagagaacggacaaaaagccc
caagttagcgatctacgcgaaagcgggagcattgagcaggatgcggacatggtcatcctg
ctctaccgcgaggatgtccacgacaaggagtcccctcgggcgggcgaggcagacctgatc
gtggccaagcaccgtaacggtcccaccgcgacggtgaccgtggcattccagggccactac
agccgatttgtcgacatggcgcccgggtga
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