Nocardiopsis gilva: CDO52_03320
Help
Entry
CDO52_03320 CDS
T05022
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngv02000
]
CDO52_03320
Transporters [BR:
ngv02000
]
Other transporters
Pores ion channels [TC:
1
]
CDO52_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
ASU81936
UniProt:
A0A223S1E8
LinkDB
All DBs
Position
671646..673250
Genome browser
AA seq
534 aa
AA seq
DB search
MARTFHRRRTLRAVALLAAGSVLLGGCSITGDVSSWFGDGSGPPKVEEDFPYTKEGRIFQ
DTGQDARMRFSINGLERTPDYTVMYYDVEYIDDIRGGNRNLAMPDTLVDPITGRVYREYL
DEEGLKYGSVSPGPKGLYPVFDGVANEYRRYFPPIPEEVKQVTFVGSGLGAMTGIPIQDV
DKERPDPEDPNGKDHLTPSDPPPAGENLTFENRRPDDDAVADQGAVESFVDSEIASTTRD
GDKETIALHSDVMFDFDKSDLTDEAEEVVRQAAASLANNVDPDDREITVIGHTDGIGTHD
YNDKLSLRRAENVRKLLREEIGSGYTYKVEGHGKREPIAREGGPDDEQARARNRRVEFSY
KVDRSTDPVEDEADDDGLGVAERSVGWPAPFTDDNGAVAATAEKDGVQLDVYPLRRDGAY
VIGTVELTNTTREPVSPDMGGADAVQAGGPEKFSKGTLGGFQLVDPETKLVRYVAQMNFG
DDKYSGFAEDVHELQPGKPYELVAVFPAPPESVEELTLRAGPFGELPEIPIEQR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggacatttcataggcggcggacactgcgggccgtcgcgctgctggccgcgggc
agcgttctgctcggcgggtgcagcatcaccggcgacgtctcctcgtggttcggtgacggc
tccgggccgccgaaggtcgaggaggacttcccctacaccaaggaagggcggatattccag
gacacgggccaggacgcgcggatgcgcttctcgatcaacggtctggagcgcacgcccgac
tacacggtcatgtactacgacgtggagtacatcgacgacatccggggcggcaaccgcaac
ctcgccatgcccgacaccctcgtcgacccgatcaccgggcgggtgtaccgcgagtacctg
gatgaggagggcctgaagtacggatcggtcagccccggccccaaggggctgtatcccgtg
ttcgacggggtcgccaatgagtaccggcgctacttcccgcccatccccgaggaggtcaag
caggtgacctttgtcggcagcggcctgggggcgatgaccgggatcccgatccaggacgtg
gacaaggagcggcccgacccggaggaccccaacggcaaggaccacctcaccccctccgac
cccccgcccgccggagagaacctcacgttcgagaaccggaggccggacgacgacgccgtc
gccgaccagggcgcggtggagagctttgtcgactccgagatcgcttcgaccacgcgcgat
ggcgacaaggagaccatcgcgctccactccgacgtcatgttcgatttcgacaagtcggac
ctcaccgacgaggccgaggaggtcgtgcgccaggctgccgcctcgctggccaacaacgtc
gaccccgacgaccgcgagatcaccgtcatcgggcacaccgacggcatcggcacccacgac
tacaacgacaagctctccctgcggcgcgccgaaaacgtgcgcaagctgctgcgggaggag
atcggcagcggatacacctacaaggtggaggggcacggcaagcgggagccgatcgcgcgc
gaaggcggccccgacgacgagcaggcgcgggcccgcaaccgccgggtggagttctcctac
aaggtcgaccggtccacggatcccgtggaggacgaggccgatgacgacggcctgggcgtc
gcggagcgcagtgtcggctggcccgcgccgttcaccgacgacaacggcgcggtcgccgcg
accgcggagaaggacggcgtgcagctggacgtctacccgctgcgccgtgacggcgcctat
gtcatcgggacggtggagctgaccaacacgacccgtgagccggtctcgccggatatgggt
ggagcggacgcggtgcaggccggcggcccggagaagttcagcaaggggaccctgggcggg
ttccagctggtggatcccgagaccaagctggtgcgctacgtcgcgcagatgaacttcggc
gacgacaagtacagcgggttcgccgaagacgtgcatgagctccagccgggcaagccctac
gagctcgtcgcggtgttccccgctccgccggagagcgtcgaggagctgaccctgcgggcc
ggacccttcggcgaacttccggagatcccgatcgagcagcggtag
DBGET
integrated database retrieval system
