Nocardiopsis gilva: CDO52_06010
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Entry
CDO52_06010 CDS
T05022
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CDO52_06010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ngv01007
]
CDO52_06010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngv03016
]
CDO52_06010
Enzymes [BR:
ngv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CDO52_06010
Amino acid related enzymes [BR:
ngv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CDO52_06010
Transfer RNA biogenesis [BR:
ngv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CDO52_06010
Prokaryotic type
Other AARSs
CDO52_06010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASU82406
UniProt:
A0A223S2P6
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All DBs
Position
complement(1260002..1263430)
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AA seq
1142 aa
AA seq
DB search
MTVISRPAEPGRKQPDGGADAATAARATAWHRVKAAIPGILATVLTLIAVLCALRALSLP
LRTRTEGIAEFIEVILVPAPPNLAYAVFLGLLAGALASRKKVAYRIALIYLALIVVLDYL
VLASLLLIGMTDSEVDWIYWFIVPNTVIMTLLLALLVAARDAFRAKVQPGSLFKALGVLS
AGLGVGVLLGWGLVEMFPGSIAPGTNRFLWTVEKVLGGALQFTVGREGNAPGWVNLTLGL
FGAIALLLAVLVLFKSQRAKAELTLPDEARIRALLDAHGERDSLGYFATRHDKTVRFSPS
GKAAVTYRVVAGVSLASGDPIGDPEAWGGAVRAWLDEAEEHAWTPAVMGAGEEGAKAYAR
AGLSVLQLGDEAILNVGDFTLEGRAMRVVRQAAHRVERAGYTLRVRRHSEIPADEMEKII
ERVDAWRDTETERGFSMALGRLGDPDDGRCVLVETLAPDGRLAAVLSFVPWGCTGLSLDV
MRRDREADNGLMEFMVSGLMKQAPRLGVQRVSLNFAVFRAAFEEGARIGAGPVLRAWRGL
LLFFSRWWQLEALYRSNVKYRPVWNPRFLCFGEARDLAKVGLASAIAEGFVTAPRLPTLF
RRSAQRPSIAAPRSVPAEQREGVAGLVAGDKTATEFDDRDPVAAERADLPEQMRVRLDKI
DAIRRDGRDPYPVGFGRTHTCAAARSLAEGLAPDTDSGTEVSITGRVTLIRDHGGVCFAT
VSDWSGEVQLMLTATATGTDGMERWRHDTDLGDHVGVRGTVATSRRGEPSVAVTEWRLTA
KCLRPLPDKRRGLADPEARVRQRYLDLTVNADARATLRARTAAIYSLRESLVGRGFMEVE
TPILQPVHGGANARPFTTHINAYDMDLYLRIAPELFLKRLCVGGVEKVFELGRTFRNEGV
SFKHNPEFTMLEAYQAYADYNDMRLLTQDMIQKAAIAANGAPVLRRRNGDGSMSEVDISG
EWPAIPINTAISEATGTEVTADTPVEELIALAGRHGVPLQEGWNRGEIVLEMYEHLVEEK
TERPTFYMDFPTEVSPLTRQHRDDPRLAEKWDLVAFGTELGTAYSELIDPVEQRKRLTAQ
SLAAAAGDPEAMELDEDFLRALEYAMPPTGGLGIGVDRLIMMITGLTIRETLPFPLVRPG
AR
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtcatttcccgcccggcggagcccggtcgcaagcagcctgacgggggtgccgac
gcggccacagcagcgcgcgccaccgcctggcaccgcgtcaaagcggcgatcccgggcatt
ctggcgacggtgctgaccctgatcgcggtgctgtgcgcactgcgagcgctgtcacttccg
ctgcgcacgcgcaccgaggggatcgccgagttcatcgaggtcatcctcgtccccgcgcca
ccgaacctcgcctacgcggtgttcctcggcctgctggccggcgccctggcctcccgcaag
aaggtcgcgtaccgcatcgcgctcatctacctggcgctgatcgtggtcctcgactacctc
gtgctggccagcctgctgctcatcggcatgaccgacagcgaggtcgactggatctactgg
ttcatcgtccccaacaccgtcatcatgacgctgctgctcgccctgctggtcgcggcccgc
gacgcgttccgggcgaaggtgcagccggggtccttgttcaaggcgctcggcgtgctcagc
gccggtctgggcgtgggcgttctgctcggctggggcctggtcgagatgttccccggatcg
atcgccccgggcaccaaccgcttcctgtggacggtggagaaggtgctgggcggcgccctg
cagttcacggtcggccgcgagggcaacgcgcccggctgggtcaacctcaccctcggcctg
ttcggcgccatcgccctgctgctcgcggtgctggtgctgttcaagtcgcagcgcgccaag
gccgaactgaccctgcccgacgaggcgcgcatccgcgcgcttctcgacgcgcacggcgag
cgcgactccctcggctacttcgccacccggcacgacaagacggtccgcttctcccccagc
ggcaaggccgccgtcacctaccgcgtcgtggccggggtcagtctggccagcggcgacccc
atcggcgatcccgaagcgtggggcggggccgtccgcgcgtggctcgacgaggccgaggag
cacgcctggacgcccgctgtcatgggcgcgggcgaggagggcgccaaggcctatgcccgc
gccgggctgagcgtcctgcagctcggtgacgaggccatcctcaacgtcggcgacttcacc
ctggagggccgcgccatgcgcgtggtccgccaggccgcccaccgcgtggagcgcgccggg
tacaccctgcgcgtccgtcggcactccgagatccccgccgatgagatggagaagatcatc
gagcgggtcgacgcctggcgcgacaccgagaccgaacgcggtttctcgatggcgctgggc
cgtctcggcgaccccgacgacgggcgctgcgtgctggtcgagacgctcgccccggacgga
cgtctggccgccgtgctgtccttcgtcccgtggggctgcaccgggctgagcctggacgtg
atgcgccgcgaccgcgaggccgacaacgggctcatggagttcatggtctccgggctgatg
aagcaggccccgcgtctaggcgtgcagcgggtctcgctcaacttcgcggtgttccgcgcg
gccttcgaggaaggggcgcgtatcggcgccgggccggtgctgcgcgcctggcgcgggctg
ctgctcttcttctcccgctggtggcagctggaggcgctgtaccgctccaacgtcaagtac
cgcccggtgtggaacccgcggttcctctgcttcggcgaggcgcgcgacctggccaaggtg
ggcctggcctccgccatcgccgagggcttcgtcaccgcgccgcggctgccgaccctcttc
cgccggtcggcgcagcggccgtccatcgccgccccccgttcggtgccagcggagcagcgc
gagggcgtcgcgggcctggtggcgggcgacaagaccgccacggagttcgacgaccgcgat
cccgtggccgccgagcgcgccgacctgcccgagcagatgcgggtccggctggacaagatc
gacgccatccgccgcgacggccgcgacccctacccggtgggcttcggccgcacgcacacc
tgcgccgcggcccgctccctcgccgagggcctggccccggacaccgacagcggcacggag
gtgtcgatcaccggccgggtgacgctcatccgcgaccacggcggcgtctgcttcgccacg
gtctccgactggagcggcgaggtccagctcatgctgaccgcgactgccaccggcacggac
ggcatggagcgctggcgccacgacaccgacctcggcgaccacgtgggagtgcggggcacg
gtggcgaccagccgccgcggcgagccgtcggtcgccgtcaccgaatggcggctcaccgcc
aagtgcctgcgccccctgccggacaagcgccgaggcctggccgaccccgaggcgcgggtc
cgccagcgctacctcgacctcaccgtcaacgccgacgcgcgcgcgaccctgcgcgcgcgt
accgccgcgatctacagcctgcgcgagtcgctggtcggacgcgggttcatggaggtcgag
accccgatcctgcagccggtccacggcggcgcgaacgcccgtccgttcaccacccacatc
aacgcctacgacatggacctctacctgcgcatcgcgccggagctgttcctcaagcggctg
tgcgtgggcggcgtggagaaggtcttcgagctgggccggacgttccgcaacgagggcgtg
tccttcaagcacaacccggaattcaccatgctggaggcctaccaggcctacgccgactac
aacgacatgcgcctgctcacgcaggacatgatccagaaggcggcgatcgcggccaacggc
gcgccggtgctgcgccgccgcaacggcgacgggtcgatgagcgaggtcgacatcagcggc
gagtggccggcgatcccgatcaacaccgcgatctcggaggccaccggcaccgaggtcacc
gccgacaccccggtcgaggagctgatcgcgctggccgggcggcacggcgttccgctgcag
gaggggtggaaccggggcgagatcgtgctggagatgtacgaacacctggtggaggagaag
acggaacggcccacgttctacatggacttccccaccgaggtgtccccgctgacccgccag
caccgggacgacccgcggctggccgagaagtgggacctggtggcgttcggcaccgagctg
ggcaccgcctactccgagctgatcgacccggtggagcagcgcaagcggctgaccgcccag
tcgctggccgccgccgcgggcgaccccgaggcgatggagctggacgaggacttcctgcgg
gcgctggagtacgccatgccgcccacgggtggcctgggcatcggcgtcgaccggctgatc
atgatgatcaccggcctgaccatccgcgagaccctgccgttcccgctggtgcggcccgga
gcacggtga
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