Nocardiopsis gilva: CDO52_07890
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Entry
CDO52_07890 CDS
T05022
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv03420
Nucleotide excision repair
ngv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDO52_07890
03430 Mismatch repair
CDO52_07890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_07890
Enzymes [BR:
ngv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDO52_07890
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDO52_07890
MMR (mismatch excision repair)
Other MMR factors
CDO52_07890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ASU82715
UniProt:
A0A223S3L8
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All DBs
Position
1687014..1689224
Genome browser
AA seq
736 aa
AA seq
DB search
MNPDRMLEGLDPEQLEAARALRGPVCILAGAGTGKTRAITHRIAHAVASGVATEQQILAV
TFTTRAAGEMRGRLRALGAPRVQARTFHAAALRQLSFFWPDAIGGPKPTLINSKIQVVAH
AARSCGLQLDGTGMRDLASEIEWAKVTQVRPTDYEKAVVKAGRTAPMAAHDVSRAYEEYE
ELRRDRNLLDFESMLELTAAMLTEYPKIGARVRDQYRYFVVDEFQDVNPLQKLLLDAWLG
ERDDLCVVGDPNQTIYSFAGATPNYLTRFSAAYPHATVVRLVRDYRSSPQVVRVANGALK
HARGAAAEHKLELVAQRPDGPDPTYTEYDDEPAEATSVARKIAVLIESGTPAREIAVLFR
TNSQSAAYEQALADAGVPFTVRGGTRFFEQPVIKQAVHTLRGARQGADDEPLISTVRHIL
TPLGLTDTAPEGRQARERWESLAALAQLAEDVAAEKPRRDGDRASGGVDADGRRPTRVGG
GASEEPERAGKQRVGMAEFVAELDARVATEHAPEFEGVTLASLHSAKGLEWDAVFLVGLT
EGMLPIVYAESSEQVEEERRLFYVGVTRAREYLALSWALARSPGGRKSRKPSRFLDGLRP
ASPSLASSRAERRKQPKVVQCRICGNTLIEAAERKLSRCLDCPADYDEELLERLKAWRRE
TAQEQKVPPYVIFTDATLQAVAEQVPSGVSQLSRISGVGAVKLERYGSAVLALCAGEEPT
AAVSAAGQTDGEDEGE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgatcgcatgctggaagggctcgaccccgaacagctggaggccgcgcgcgcc
ctgcgcggcccggtgtgcatcctggcgggcgccggtacggggaagacccgcgcgatcacg
caccgcatcgcccacgcggtcgccagcggcgtggccaccgagcagcagatcctcgcggtg
accttcaccacccgcgccgccggtgagatgcgcggacggctgcgcgccctgggcgcacca
cgggtgcaggcccgcacgttccacgccgccgcgctgcgccagctctcctttttctggccc
gatgccatcggcggaccgaaacccacgctgatcaacagcaagatccaggtggtcgcgcac
gccgcccgctcctgtggcctgcagctcgacggcacgggcatgcgcgacctcgccagcgag
atcgaatgggccaaggtcacccaggtccgccccaccgactacgagaaggccgtcgtcaag
gccgggcgcaccgcccccatggcggcccacgacgtctcccgcgcctacgaggagtacgag
gagctgcgccgcgaccgcaacctgctcgacttcgagtcgatgctggagctcaccgcggcg
atgctcaccgagtacccgaagatcggcgcgcgcgtccgcgaccagtaccgctacttcgtg
gtcgacgagttccaggacgtcaacccgctgcagaagctgctgctggacgcctggctgggc
gaacgcgacgacctgtgcgtcgtcggagaccccaaccagaccatctactccttcgccggg
gccacgcccaactacctcacccgcttctccgccgcctacccgcacgccacggtggtgcgg
ctggtccgcgactaccggtccagcccgcaggtggtccgggtggccaacggtgccctgaag
cacgcgcgcggtgcggcggccgagcacaagctggagctggtcgcgcagcgccccgacggc
ccggaccccacctacaccgagtacgacgacgagccggccgaggccacctcggtggcgcgc
aagatcgcggtgctgatcgagtccggaacgccggcccgcgagatcgcggtgctgttccgc
accaactcccagtcggccgcctacgagcaggcgctcgccgacgccggggttccgttcacc
gtgcgcggcggcacccgcttcttcgagcagccggtgatcaagcaggccgtgcacacgctg
cgcggcgcccgccagggtgccgacgacgagccgctgatcagcacggtccggcatatcctc
accccgctcgggctcaccgacaccgcgcccgagggccgccaggcccgcgaacgctgggag
tcgctggcggcgctggcgcaactcgccgaggatgtggcggcggaaaagccgcgacgcgac
ggcgatcgagcgagcggaggcgtcgatgccgatggccggaggccgactcgcgtcggcggt
ggagcgagtgaggagccggagcgcgcaggcaagcagagggtcgggatggcggagttcgtc
gccgagctcgacgcccgtgtggccaccgagcacgccccggagttcgagggcgtcaccctg
gcctcgctgcactcggccaagggcctggagtgggacgccgtcttcctcgtcgggctgacc
gagggcatgctccccatcgtctacgccgagtcctccgagcaggtcgaggaggagcggcga
ctcttctacgtcggcgtcacccgggcccgcgagtacctcgcgctgtcgtgggcgctggcg
cgctcgcccggcgggcgcaagagccgcaagccctcgcggttcctcgacggcctgcgcccg
gcctcgcccagcctcgccagcagccgggccgagcgccgcaagcagcccaaggtcgtgcag
tgccgcatctgcgggaacaccctcatcgaggcagccgagcgcaaactctcccgctgcctg
gactgcccggccgactacgacgaggagctgctggagcggctcaaggcgtggcgccgcgag
accgcccaggagcagaaggtcccgccctacgtcatcttcaccgacgccacgctgcaggcg
gtggccgaacaggtaccgagcggcgtctcccagctgtcgcgcatatccggtgtcggggcc
gtgaagctcgaacggtacggttcggcggtactggcgctctgcgcgggcgaggagcccacc
gcggccgtatcggcggcgggccagacggatggggaggacgagggggagtag
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