Nocardiopsis gilva: CDO52_08365
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Entry
CDO52_08365 CDS
T05022
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00260
Glycine, serine and threonine metabolism
ngv00460
Cyanoamino acid metabolism
ngv00630
Glyoxylate and dicarboxylate metabolism
ngv00670
One carbon pool by folate
ngv00680
Methane metabolism
ngv01100
Metabolic pathways
ngv01110
Biosynthesis of secondary metabolites
ngv01120
Microbial metabolism in diverse environments
ngv01200
Carbon metabolism
ngv01230
Biosynthesis of amino acids
ngv01240
Biosynthesis of cofactors
ngv04981
Folate transport and metabolism
Module
ngv_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDO52_08365
09102 Energy metabolism
00680 Methane metabolism
CDO52_08365
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDO52_08365
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CDO52_08365
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CDO52_08365
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CDO52_08365
Enzymes [BR:
ngv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CDO52_08365
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
SelA
Met_gamma_lyase
DUF3440
Motif
Other DBs
NCBI-ProteinID:
ASU82792
UniProt:
A0A223S3T8
LinkDB
All DBs
Position
complement(1779909..1781180)
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AA seq
423 aa
AA seq
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MTETRNILDQPLAQYDPEVAAAVNDELARQRDTLEMIASENFAPQAVLEAQGTVLTNKYA
EGYPGRRYYGGCEHVDVVEQLAIDRAKALFGAEHANVQPHSGAQANTAVYFALLKPGDTI
LGLDLAHGGHLTHGMRLNYSGKILNAVAYHVRDEDGTVDYDEVEKLAKEHQPKMIVAGWS
AYPRQLDFARFREIADEVGAILFVDMAHFAGLVAAGLHPNPVPYADVVTTTTHKTLGGPR
GGLILAKEELGKKINSAVFPGMQGGPLEHVIAAKAVALKMAAGEEFADRQRRTQAGARIL
AERLTQPDAVEAGVRVLTGGTDVHLVLVDLVNSELNGREAEDRLHEIGITVNRNAVPNDP
RPPMVTSGLRVGTPALATRGFDETDFAEVADILAEALEPEYDAAALRDRVVALARKHPLY
PGL
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagacgcgcaacatcctcgaccagccgctggcgcagtacgaccccgaggtcgcg
gcggccgtcaacgacgagctcgcccggcagcgtgacacgctggagatgatcgcctccgag
aacttcgcgccccaggcggtgctggaggcccaggggaccgtcctcaccaacaagtacgcc
gagggctaccccggccgccgctactacggcggctgcgagcacgtcgacgtcgtcgagcag
ctcgcgatcgaccgcgccaaggcgctgttcggcgccgagcacgccaacgtgcagccgcac
tcgggcgcccaggccaacacggcggtgtacttcgcgctactcaagccgggcgacaccatc
ctcggcctggacctcgcgcacggcgggcacctgacccacggcatgcggctcaactactcc
ggcaagatcctcaacgccgtggcctaccacgtgcgcgacgaggacggcaccgtcgactac
gacgaggtcgagaagctcgccaaggagcaccagccgaagatgatcgtggccgggtggtcg
gcctacccgcggcagctggacttcgcccggttccgcgagatcgccgacgaggtcggcgcg
atcctgttcgtcgacatggcgcacttcgccggtctggtggcggccgggctgcaccccaac
ccggtgccctacgccgacgtcgtcaccaccaccacgcacaagaccctcggcggccctcgc
ggcgggctcatcctcgccaaggaggagctgggcaagaagatcaactcggcggtgttcccc
ggcatgcagggcggcccgctggagcacgtgatcgcggcgaaggcggtcgcgctgaagatg
gcggcgggcgaggagttcgccgaccgccagcggcgcacccaggccggtgcgcggatcctc
gccgagcgcctgacccagcccgacgccgttgaggccggggtgcgggtgctcaccggcggc
accgatgtgcacctggtgctggtggacctggtgaactccgagctcaacggccgggaggcc
gaggaccgcctgcacgagatcggcatcacggtcaaccgcaacgcggtgcccaacgacccg
cgcccgccgatggtcacgtccggcctgcgcgtcggcacgccggcgctggccacccggggc
ttcgacgagacggacttcgccgaggtcgccgacatcctcgccgaggcgctcgagccggag
tacgacgcggccgccctgcgcgaccgcgtggtcgccctcgcgcgcaagcacccgctctac
ccgggcctgtag
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