Nocardiopsis gilva: CDO52_10365
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Entry
CDO52_10365 CDS
T05022
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngv03032
]
CDO52_10365
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_10365
Enzymes [BR:
ngv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CDO52_10365
DNA replication proteins [BR:
ngv03032
]
Prokaryotic type
DNA Topoisomerases
CDO52_10365
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDO52_10365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF6026
HALZ
Motif
Other DBs
NCBI-ProteinID:
ASU83132
UniProt:
A0A223S4S4
LinkDB
All DBs
Position
complement(2256104..2258581)
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AA seq
825 aa
AA seq
DB search
MARTTSAPPEEPAEKIIDIDVSEEMRGSFLEYAYSVIYSRALPDARDGMKPVQRRILYQM
NEMGLRPDRAHVKCARVVGEVMGKLHPHGDSAIYDAMVRMSQDFAMRVPLVDGHGNFGSL
GGDDAPAAMRYTESRMARAAQLLVTSIDENVVDFQPNYDGQEMEPEVLPAAFPNLLVNGA
SGIAVGMATNMAPHNLGEVIAAARHLIAKPDATLDELMEFVPGPDLPTGGTINGLDGIRD
AYAKGRGTFKTRATVSIEKVSPRRTGLVITELPYNVGPEKVVGRIKELVQSKKLQGISDL
KDLTDRNQGLRLVIELKNGFNPEAVLEELYRLTPMEESFGINNVALVDGQPQTLGLRELL
QVFVDHRLDVVRRRCEHRRSKRQERLHLVAGLLVALLNIDEVIALIRQSEDTAQARQRLM
STFELSDTQARYILDTPLRRLTKYDRLELENERDQLNSEIAELTAILESDKKLRKVVSGE
LAKVAKEFGVPRRTVLRESSGATRSAVIPLEMGDEPCHVLMSTTGQLGRSKGATLPRMHD
GLRTEHDAVALSIPARTRGDLGFITDLGRMIRVPVVELPELPDGDGDTPALAAGVPASEF
VELDTDERLASIVAMNADGPGIVLGTEHGIVKRVAPEYPTNKDDFEVINLKEGDRIIGAA
QLSTGEEDLVFVTSQAQLLRFPASAVRPQGRAAGGVAGVKLSDDARAVWFGVVALPEDSV
VVTVTGSSTALPGTQAGAAKVTPFEVYPAKGRATGGVRCQRFLKGEDTLLFAWIGRAPAR
ANRADGGPVRLPDLDQRRDGSGEPLTSPVAIVGSGRTDSGATPPA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtactacatccgctccccctgaggaacccgccgagaagatcatcgacatcgat
gtctccgaggagatgcgcggcagcttcctggagtacgcctactcggtgatctactcgcgc
gcgctgccggacgcccgcgacgggatgaagccggtacagcgccgcatcctctaccagatg
aacgagatggggctgcgccccgaccgcgcccacgtgaagtgcgcccgcgtggtcggcgag
gtgatgggtaagctccacccccacggcgacagcgcgatctacgacgccatggtgcggatg
agccaggacttcgccatgcgcgtcccgctcgtcgacgggcacggcaacttcggctcgctg
ggcggcgacgacgcccccgccgccatgcgctacaccgagtcccggatggcccgcgccgcc
cagctcctggtcacgtccatcgacgagaacgtcgtggatttccagcccaactacgacggc
caggagatggagccggaggtgctcccggcggccttccccaacctcctggtcaacggcgcc
tcggggatcgcggtgggcatggccaccaacatggccccgcacaacctgggcgaggtcatc
gcggccgcgcggcacctcatcgccaagcccgacgccacgctggacgagctcatggagttc
gtgcccggcccggacctgcccaccggcggcaccatcaacgggctcgacggcatccgcgac
gcctacgccaagggccgcggcaccttcaagacccgcgccaccgtctccatcgagaaggtc
tcgccgcgccgcaccggcctggtcatcaccgagctcccctacaacgtcggcccggagaag
gtcgtcggccggatcaaggagctggtccagtccaagaagctgcagggcatctcggacctc
aaggacctcaccgaccgcaaccagggcctgcgcctggtcatcgagctgaagaacgggttc
aaccccgaggcggtcctggaggagctgtaccggctcacgccgatggaggagtccttcggc
atcaacaacgtggcgctcgtcgacgggcagccgcagacgctgggcctgcgcgaactgctg
caggtcttcgtcgaccaccggctcgacgtggtgcgccgccgctgcgagcaccgccgcagc
aagcgccaggagcgcctgcacctggtcgccggcctcctcgtcgcgctgctcaacatcgac
gaggtcatcgcgctgatccggcagtccgaggacaccgcgcaggcgcggcagcggctgatg
tcgaccttcgagctctccgacacccaggcccgctacatcctcgacactccgctgcgccga
ctcaccaagtacgaccggctggagctggagaacgagcgcgaccagctcaactcggagatc
gccgagctcaccgcgatcctggagtcggacaagaagctgcgcaaggtggtctccggcgag
ctggccaaggtggccaaggagttcggcgtgccccgccgcaccgtcctgcgggagagctcc
ggcgccacgcgcagcgcggtgattccactggagatgggcgacgagccctgccacgtgctg
atgagcaccaccggccagctgggccgcagcaagggtgccacgctgccgcggatgcacgac
ggcctccgtaccgagcacgacgccgtcgccctgtcgatcccggcgcggacgcgcggcgac
ctcgggttcatcaccgatctcggccggatgatccgcgtgcccgtggtggagctccccgaa
ctgccggacggcgacggcgacaccccggccctggccgcgggggtcccggcgagcgagttc
gtggaactggacaccgacgaacggctggcctccatcgtcgcgatgaacgccgatggcccg
gggatcgtcctggggaccgagcacgggatcgtcaagcgcgtcgcgccggagtacccgacg
aacaaggacgacttcgaggtcatcaacctcaaggagggcgaccggatcatcggcgccgcc
cagctgtccacgggtgaggaggacctcgtcttcgtcacctcgcaggcccaactgctgcgg
ttccccgcctcggccgtccgaccgcaggggcgcgcggccggcggcgttgccggggtgaag
ctgtccgacgacgcccgggccgtgtggttcggagtggtcgccctgcccgaggactcggtg
gtcgtcacggtcacgggttcctcgacggcgctgcccggcacccaggccggggcggcgaag
gtgacgccgttcgaggtgtacccggccaagggccgcgccaccggcggcgttcgctgccag
cgcttcctcaagggggaggacaccctgctgttcgcctggatcggccgcgccccggcccgc
gccaaccgcgccgacggcggcccggtgcgcctgcccgacctcgatcagcgccgcgacggc
tccggcgagccgctgaccagccccgtcgccatcgtgggcagtgggcggaccgactccggg
gcaacgcccccggcctga
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