Nocardiopsis gilva: CDO52_11025
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Entry
CDO52_11025 CDS
T05022
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ngv
Nocardiopsis gilva
Pathway
ngv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDO52_11025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngv02000
]
CDO52_11025
Transporters [BR:
ngv02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CDO52_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ASU83236
UniProt:
A0A223S510
LinkDB
All DBs
Position
2417513..2419369
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AA seq
618 aa
AA seq
DB search
MVARQQQPRPRSPGRTAPSRWVGLLAAAGALVIGALPAAAPSAAAAETTGDDDTMTIAVS
QPVDSLSPFVAQRLISTNILRLSYDFLTNYDAETNETIPGLAESWETSEDGLTWTFKIRD
DVTWSDGEPLTAEDIAWTYTTIMEDEAAAKANGNFVANFESAEAPDPTTLKITLSERQAT
MLALDIPIVPKHVWEKVDDFGTFNNDKDFPVVGSGPFTITGYRPNQSVTLEANTDYWRGA
PEFEKLVFRFIPEKDAQVEALRSGEVDLISGLTPAQADALQGEENITVNTASGKRFQAFT
INPGARTQDGEEFGDGHPALKDKTLRQAIMRAIDKDEIVQKVYGGYAEPAGGYIPARYER
YAWSPEGDERLDFDVDAANKMLDDAGYAMGDDGVRVSPDGDRLKLRMHVHNNRPDYVSMG
RLMQERLADIGIEVDNRTVDPGVLSDALHNGKYDLIFTGWSVNPDPDYVLGIHTCDALPE
TPGTMRGDAYFCDRKYDELYDKQLAEDSDPEKRAEYVKQMQAVLYDEAVVNTLTYSNLLE
AYRSDVIGSIQVQPDPGGNIWGQDGHWSFSMATPAAAGSGGTGLSAGVMAGIAAAVVLGV
AAGGFFLWRRSATAEDRE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctcggcagcaacaacccagaccacgctctcccggacgaacggccccgtcccgc
tgggtgggcctcctggccgctgcgggcgccctcgtcatcggggcgctcccggccgccgcg
cccagcgctgccgccgccgagaccacgggcgacgacgacacgatgaccatcgcggtctcc
cagccggtcgactcgctgagccccttcgtggcgcagcggctcatcagcaccaacatcctg
cggctgagctacgacttcctcaccaactacgacgccgagaccaacgagacgatccccggg
ctcgcggagtcgtgggagacctctgaggacggcctcacctggaccttcaagatccgcgac
gacgtgacgtggagcgacggcgagccgctgaccgccgaggacatcgcctggacgtacacc
acgatcatggaggacgaggcggcggccaaggccaacggcaacttcgtcgccaacttcgag
agcgctgaggcgcccgaccccaccacactcaagatcacgctctccgagcggcaggcgacc
atgctcgccctggacatccccatcgtgcccaagcacgtctgggagaaggtcgacgacttc
ggcaccttcaacaacgacaaggacttcccggtcgtcggcagcgggccgttcaccatcacc
ggctaccggcccaaccagtccgtcacgctcgaggccaacacggactactggcgcggcgcc
cccgagttcgaaaagctcgtcttccgcttcatcccggagaaggacgcccaggtcgaggcg
ctccgctccggcgaggtcgatctcatcagcggcctcaccccggcgcaggccgacgcgctg
cagggcgaggagaacatcaccgtcaacaccgcgagcggaaagcggttccaggccttcacc
atcaaccccggcgcccgcacccaggacggcgaggagttcggcgacggccacccggcgctc
aaggacaagaccctgcgccaggccatcatgcgcgccatcgacaaggacgagatcgtccag
aaggtctacggcggctacgccgagcccgccggcggctacatcccggcccgctacgagcgc
tacgcctggtcccccgagggcgatgagcgcctcgacttcgacgtcgacgccgccaacaag
atgctcgacgacgccgggtacgcgatgggcgacgacggggtccgggtctcacccgacggc
gaccgcctcaagctgcgcatgcacgtccacaacaaccgccccgactacgtgagcatgggt
cggctcatgcaggagcggctcgcggacatcggcatcgaggtcgacaaccggaccgtcgac
cccggcgtgctcagcgacgccctgcacaacggcaagtacgacctcatcttcaccggctgg
agcgtcaaccccgaccccgactacgtgctcggcatccacacctgcgacgcgctgcccgag
acgcccggcaccatgcgcggcgacgcctacttctgcgacaggaagtacgacgagctgtac
gacaagcagctcgccgaggacagcgaccccgagaagcgcgccgagtacgtcaagcagatg
caggcggtcctgtacgacgaggccgtggtcaacacgctgacctactccaacctgctggag
gcctaccgctccgatgtgatcggctcgatccaggtccagcccgaccccggcggcaacatc
tggggccaggacgggcactggtcgttctcgatggccacgcccgccgcggcgggcagcggc
ggcacgggcctgtccgccggcgtgatggccggaatcgcggccgcggtcgtgctcggcgtg
gcggccgggggcttcttcctctggcgccgctcggccacggctgaggatcgagagtga
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