Nocardiopsis gilva: CDO52_12285
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Entry
CDO52_12285 CDS
T05022
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv03030
DNA replication
ngv03430
Mismatch repair
ngv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDO52_12285
03430 Mismatch repair
CDO52_12285
03440 Homologous recombination
CDO52_12285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngv03032
]
CDO52_12285
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_12285
Enzymes [BR:
ngv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDO52_12285
DNA replication proteins [BR:
ngv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDO52_12285
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDO52_12285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASU83459
UniProt:
A0A223S5Z7
LinkDB
All DBs
Position
2703441..2707007
Genome browser
AA seq
1188 aa
AA seq
DB search
MADSFAHLHVHTEYSMLDGAAKLKPLFAEAANQGMPAVAMTDHGNMFGAYEFYQQSQGTG
VKPIIGIEAYVAPESRFHKKRVQWGRSAGTDDASTEGGKDISGGGRYLHMTMLAENEIGL
RNLFRLSSLASIEGYYMKPRMDLELMSQYSEGIIVSTGCPSGGVQTRLRLGQEKEAIEYA
AKLQDIFGRENVFLELMDHGVDIEKQVRSGLLKVGKELSIPPLVTNDSHYVYESQATAHD
ALLAVGVGKNLDDPTRFRFNGAGYYLKTADEMRGILNFDEWAQGCKNTLLVAERIAPDAY
DNVFASRDLSPKFPVPEGESQLSWLKKEVERGIPTRFPDGASEEVRQRIEYELGIIESMG
FPAYFLVVADICQYARKNDIALGPGRGSATGSMVAYVLGITDLDPIEHSLIFERFLNPER
VTMPDVDLDFDERRRGEMIDYVTRMYGEENTAQILTFGTIKAKAAVKDSTRILGFPYSLG
DQITKAFPAAANGKEIPLDAVYSEDHERHAETTELRSLMEKDQQVNKVMETARGIEGLTR
GTGVHAAGVILSDVPLLDVIPLHKRDTDGAIITGFPFPQCEEMGLLKMDFLGLRNLTVID
DAVKNVKEAEGIDIDLPTLPLDDEKTYKLLSRGDTLGVFQLDGGAMRNLLKRMEPKKFGD
IAAVLALYRPGPMAANAHNDYADRSNGRQDITPIHPELEAALEPILGETFHLLVYQEQVM
AIAQQLAGYSLGGADLMRRAMGKKKKEALEKEEVKFFEGAKERGFSQEAVQALWDVMLPF
SGYAFNKSHTAGYGLVSYWTAYLKANHPASYMAALLTSVGDDKDKMAVYLAECRSQGINV
LPPDVNESGLRFTPVGRDIRFGMGAVRNVGGNVVHSITTTRTEKGKFSSFTDFLSKIELA
ACNKRVVESLIKAGAFDSLGQPRQALYRHHETAVEGMISSKKQEANGQFDLFGGGDADAG
DSTPIGLNINWGDDEWDRKTKLAFEREMLGLYVSSHPLSGAERILARSRDTSITQIVAGE
RGGERGEVRIAGLISKVDKRVNKAGNQWAIATVEDLDASMEVLFFPKTYPLYMDALMEDT
AVTVKGRLNDRDGTWSMFASEMSILDISHVSEGPPPMLLTVQDKRLTPELVDELKQVLKA
HRGETPLTIRVDHPVKSRVFEIPGYPIQVGPEFSGDVKSLLGPDAVTY
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccttcgctcacctgcacgtccacaccgagtactcgatgctcgacggagcg
gcgaagctcaagccgctcttcgcggaggcggcaaaccagggaatgcccgctgtggcaatg
acagaccacggcaacatgttcggcgcctacgagttctaccagcagtcgcagggcaccggc
gtcaaaccgatcatcggcatcgaggcctacgtcgcgccagagtcccggttccataagaag
cgggtccagtggggacgttcggcgggtacggacgacgcctcaaccgagggtggcaaggac
atctcaggtggtggccgctacctgcacatgacgatgctcgcagagaacgagatcgggctg
cgcaatctcttccgcctctcctcactcgcgtcgattgagggctactacatgaagccccgg
atggacctggaactgatgtcccagtacagcgagggcatcatcgtcagcaccggctgtccc
tccggtggcgtgcagacgcgcctgcgactcggccaggagaaggaggcgatcgagtacgcc
gccaagctgcaggacatcttcggccgggagaacgtcttcctggagctgatggaccacggc
gtggacatcgaaaagcaggtccgctccgggctcctgaaagtcggcaaggaactcagcatc
ccgccgctggtcaccaacgactcgcactatgtctacgagagccaggccaccgcgcatgac
gcgttgctggctgtcggtgtcggtaagaacctggacgaccccacgcggttccggttcaac
ggtgcgggttactacctcaagaccgccgacgagatgcgcggcatcctcaacttcgacgag
tgggcgcaggggtgcaagaacacgctgctcgtggccgaacgcatcgcccccgacgcctac
gacaacgtcttcgcttcccgggacctgtcacctaagttccctgttcccgagggcgaaagc
cagctctcctggctgaagaaggaagtcgagcgcggcatccccacacgcttccccgacggg
gcaagcgaggaagtgcgccagcggatcgagtacgaactcggcatcatcgagtccatgggc
ttcccggcctacttcctcgtcgtcgccgacatctgccagtacgcgcggaagaacgacatc
gccctcggcccgggccggggctcggcgaccggctcgatggtcgcctacgtcctgggcatc
accgaccttgacccgatcgagcacagcctcatcttcgagcggttcctcaaccccgaacgt
gtcaccatgcccgatgtcgacctggacttcgacgagcgtcggcgcggcgagatgatcgac
tatgtcactcgcatgtacggggaggagaacacagcccagatcctgaccttcggcactatc
aaggccaaggccgcggtgaaggactcgacccggatcctcgggttcccctactccctcggc
gaccagatcaccaaagccttccccgcagctgccaacggcaaggagatcccgctcgacgcc
gtttacagcgaggaccatgagcggcacgcggaaacgaccgagctgcgctcgttgatggag
aaggatcagcaggtcaacaaggttatggagaccgctcgcggtatcgagggcctgacccgc
ggcaccggcgtccacgcggctggcgtcatcctctccgacgtaccgctcctcgacgtcatc
cccctgcacaagcgcgacaccgacggcgccatcatcaccgggttcccattccctcagtgc
gaggaaatgggcctgctcaagatggacttcctcggcctgcggaatctcaccgtgatcgac
gacgcggtgaagaacgtcaaggaggccgaggggatcgacatcgatctgccgacgctcccg
ctcgatgacgagaagacctacaagctcctgtcgcgaggtgacaccctcggcgtcttccag
ctcgacggtggcgcgatgcgcaacctgctcaagcgcatggaaccgaagaagttcggtgac
atcgccgctgtgctcgcgctctaccggcccggccccatggcggcgaacgcccacaacgac
tacgccgaccgctcgaatgggcggcaggacatcaccccgatccatcccgagctcgaggct
gcccttgagccgatcctcggtgagaccttccacctgctcgtctaccaggagcaggtcatg
gccatcgcccagcagctggccgggtacagcctgggcggcgccgacctcatgcgccgggcg
atgggcaagaagaagaaggaagccctcgaaaaggaagaggtcaagttcttcgagggcgcc
aaggaacggggcttttcacaggaggccgtccaggccttgtgggacgtcatgctgccgttc
tccggctatgcgttcaacaagtcgcacaccgccgggtacgggctcgtctcctactggacc
gcctacctcaaggccaaccaccccgcctcctatatggcggcccttctgacgtctgtcggt
gacgacaaggacaagatggccgtctacctggccgaatgccggtcccagggcatcaatgtg
ctgccccccgacgtcaacgagtccggtctgcggttcaccccggtcggccgggacatccgc
ttcggtatgggcgccgtccgcaacgtgggtgggaacgtcgtccactccatcaccacgacc
cgcaccgagaagggcaagttcagctccttcaccgatttcctgtccaagatcgagctggcg
gcctgcaacaagcgcgtcgtcgaatcgctgatcaaggccggtgccttcgactcgctgggc
cagccacgccaggcgctgtaccgccaccacgagaccgcggtcgaggggatgatcagctcc
aagaagcaggaggcgaacggccagttcgacctgttcggcggcggggacgccgatgcgggc
gactccacgcccatcgggctcaacatcaactggggcgatgacgagtgggaccgcaagacc
aagctcgcgttcgagcgggagatgctcggcctgtacgtctccagccacccgctctcgggc
gccgagcggatcctcgcccggtcccgtgacacctcgatcacccagatcgtggcgggtgag
cgcggcggcgagcgcggtgaggtccgcatcgccggactgatctccaaggtcgacaagcgc
gtgaacaaggcgggcaaccagtgggccatcgccacggtggaggacctggacgccagcatg
gaagtcctgttcttccccaagacctaccccctgtacatggacgccctgatggaggacacc
gccgtcaccgtcaagggccggctcaacgaccgcgacggcacctggtcgatgttcgcctcc
gagatgtcgatcctggacatctcccacgtctcggaggggccgccccccatgctgctcacc
gtgcaggacaagcgcctcacgccggagctggtggatgagctcaagcaggtcctgaaggcc
caccggggcgagaccccgttgacgatccgggtcgaccacccagtcaagagccgggtgttc
gagatcccgggctacccgatccaggtggggccggagttctccggcgatgtgaagtccctg
ctggggccggacgcggtcacgtactga
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