Nocardiopsis gilva: CDO52_13620
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Entry
CDO52_13620 CDS
T05022
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv00260
Glycine, serine and threonine metabolism
ngv00630
Glyoxylate and dicarboxylate metabolism
ngv00670
One carbon pool by folate
ngv00785
Lipoic acid metabolism
ngv01100
Metabolic pathways
ngv01110
Biosynthesis of secondary metabolites
ngv01200
Carbon metabolism
Module
ngv_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDO52_13620 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDO52_13620 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CDO52_13620 (gcvP)
00670 One carbon pool by folate
CDO52_13620 (gcvP)
Enzymes [BR:
ngv01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
CDO52_13620 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
IF2_N
Motif
Other DBs
NCBI-ProteinID:
ASU83688
UniProt:
A0A223S6E7
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Position
2967043..2969934
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AA seq
963 aa
AA seq
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MPEQPTHENTTGGAPARVFADRHIGPDPAELGHMLKAVGFGSTTDLMTAAVPESILSTPG
GPAPLRLPEAAGETAALAELRALADRNQVLTSMIGRGYYGTVTPPVILRNILENPAWYTA
YTPYQPEISQGRLEALLNFQTMVSDLTGLAVSGASLLDEATAAGEAMTLARRATRSKAAT
FIVDSDTFPQTLSVLRTRAEPLGIDIVVADLSEGLPDIEAFGVLVQYPAASGAIRDPRPV
IDAAHERGALAVVAADILALTMLRSPGEMGADIAVGSTQRFGVPMGFGGPHAGYMSVREG
LQRQLPGRLVGVSVDNAGKPAYRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVYH
GPHGLRAIAEDVHGRTARLAEGLRARGFEVLHGDFFDTLRVRVQGGADGVLQAARERGVN
LLRVSDDIVGVSCDETTADEHLGLVLSAFGGKEGTGVGDGAAVALPEALRRGVDYLDHQV
FNTHRSETSLLRYMRRLADKDLALDRSMIPLGSCTMKLNSTAEMESITWPAFAELHPFAP
LEQAAGTVALVRDLEAWLAEVTGYDAVSLQPNAGSQGELAGLLAIRGYHRERGEAQREVC
LIPSSAHGTNAASAVMAGMRVAVVACDKGGNIDLDDLRAKIDKHGDELAALMVTYPSTHG
VYEDTITEVCRLVHEAGGQVYVDGANLNALLGWAKPGKFGADVSHLNLHKTFCIPHGGGG
PGVGPVAVRSHLAGFLPNHPGQPDAGPHTGVGPVSAAPFGSAGILPISWAYIRMMGEQGL
RSATEVAVLSANYVAKRLEPYYPVLYTGKGGLVAHECIIDIRDLAKKTGITNEDVSKRLI
DYGFHAPTMSFPVAGTLMVEPTESENLAELDRFIDAMIAIRAEIDRVADGTYDAEDNPLK
NAPHTAEALTVDDWKHSYTRGEGGYPVPELRLNKYWSPVGRIDQAYGDRNLVCACPPPEA
FEE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcagcccacccatgagaacaccacggggggagcgcccgcgcgcgttttcgcc
gaccggcacatcggcccggacccggcggaactcggccacatgctcaaggcggtcggattc
gggtccacgacggatctgatgactgccgccgtcccggagagcattctcagcacgccgggt
ggtcccgctccgctgcggcttccggaggcggccggggaaaccgccgcgctcgccgagctg
cgcgccctcgccgaccgcaaccaggtcctcacgtcgatgatcggtcgcgggtactacggc
acggtcaccccgccggtgatcctccgcaacatcctggagaacccggcctggtacacggcc
tacaccccctaccagcccgagatctcccaggggcgcctcgaagccctgctgaacttccag
acgatggtcagcgacctcaccgggctcgcggtctccggggcctccctcctcgacgaggcg
accgccgcgggcgaggccatgacgctcgcccggcgcgccacgcgcagcaaggccgcgacc
ttcatcgtcgactccgacaccttcccgcagacactgtcggtgctgcgcacccgcgccgag
ccgctcggtatcgacatcgtcgtcgccgatctgagcgagggcctgcccgacatcgaggcg
ttcggcgtgctcgtgcagtaccccgccgccagcggcgcgatccgcgatccgcgcccggtc
atcgatgcggcccacgagcgcggcgccctggccgtcgtcgcggccgacatcctcgccctg
accatgctccgcagcccgggtgagatgggcgccgacatcgccgtcggctcgacccagcgc
ttcggcgttcccatgggcttcggcgggccgcacgccggctacatgtcggtgcgcgagggc
ctgcagcgccagctgcccggccgcctcgtcggcgtctcggtcgacaacgcgggcaagccc
gcctaccgcctcgccctgcagacccgtgagcagcacatccgccgcgagaaggccaccagc
aacatctgtacggcccaggtcctgctggctgtcatggccgggatgtacgcggtctaccac
ggcccgcacgggctgcgcgcgatcgccgaggacgtgcacggccgcaccgcccggctcgcc
gaggggctgcgggcccgcggcttcgaggtcctgcacggcgacttcttcgacaccctgcgc
gtccgcgtccagggcggcgccgacggcgtgctgcaggcggcccgcgagcgcggggtgaac
ctgctgcgcgtctccgacgacatcgtcggcgtgtcctgcgacgagaccaccgccgacgag
cacctgggcctggtgctgtcggcgttcggcggcaaggagggcaccggagtgggcgacggc
gcggccgtcgccctgcccgaggcgctgcgccgcggcgtggactacctcgaccaccaggtc
ttcaacacccaccgcagcgagacgtccctgctgcgctacatgcgccggctggccgacaag
gacctcgccctggaccgcagcatgatcccgctcggctcctgcaccatgaagctcaactcc
acggccgagatggagtcgatcacctggccggcgtttgccgagctgcacccgttcgccccc
ctggagcaggccgccggaaccgtcgccctggtgcgcgacctggaggcgtggctggccgag
gtcaccgggtacgacgcggtgtcgctgcagcccaacgccgggtcgcagggggagctcgcc
ggtctgctggcgatccgcggctaccaccgcgagcgcggcgaggcccagcgcgaggtctgc
ctgattcccagctccgcccacggcaccaacgcggccagcgcggtgatggccggtatgcgg
gtcgccgtggtggcctgcgacaagggcggcaacatcgacctggacgacctgcgcgccaag
atcgacaagcacggcgacgagctggccgcgctgatggtgacctacccgtccacgcacggc
gtctacgaggacaccatcaccgaggtgtgccgcctggtgcacgaggccggcggccaggtc
tacgtggacggcgccaacctcaacgcgctgctcggctgggccaagccgggcaagttcggg
gccgacgtcagccacctcaacctgcacaagaccttctgcatcccgcacggcggcggcggt
ccgggtgtcggcccggtggcggtgcggtcgcacctggccgggttcctccccaaccacccg
ggccagcccgacgcgggtccgcacaccggtgtcggccccgtctcggcggcgccgttcggc
tcggccgggatcctgccgatctcctgggcctacatccggatgatgggggagcaggggctg
cgctcggccaccgaggtggcggtcctcagcgccaactacgtcgccaagcggctggagccc
tactacccggtcctgtacaccggcaagggcgggctggtcgcccacgagtgcatcatcgac
atccgcgacctggccaagaagaccggcatcaccaacgaggacgtgtccaagcggctgatc
gactacggtttccacgcccccaccatgtcgttcccggtggccgggaccctcatggttgag
cccacggagagcgagaacctggcggagctggaccgcttcatcgacgcgatgatcgcgatc
cgcgccgagatcgaccgcgtcgccgacggcacctacgacgccgaggacaacccgctgaag
aacgccccgcacaccgccgaggcgctcaccgtcgacgactggaagcactcctacacccgc
ggcgagggcggctaccccgtgccggagctgcggctgaacaagtactggtccccggtcggc
cgcattgaccaggcctacggcgaccgcaacctcgtctgcgcctgcccgccgcccgaggcc
ttcgaggagtaa
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