KEGG   Nocardiopsis gilva: CDO52_14280
Entry
CDO52_14280       CDS       T05022                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
ngv  Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngv03400]
    CDO52_14280
Enzymes [BR:ngv01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     CDO52_14280
DNA repair and recombination proteins [BR:ngv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    CDO52_14280
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: ASU83794
UniProt: A0A223S6P4
LinkDB
Position
complement(3136598..3137257)
AA seq 219 aa
MSDALFAVPAEPVEVSPGAVHVPGWLSTETQRRLVELCREWSRGPAGMRRHRMPRGGMMS
VRMVSLGWHWEPYRYSRTLPDGEPVAPFPSLLGELARAGVADAYGAPLASGTPDYDVALV
NYYDADAKMGMHQDREEQADVPVVSLNLGDACVFRFGNTENRSRPYTDVELRGGDLFVFG
GPSRMAYHGVPRILPGTADPDVGLAKGRLNITIRASGLE
NT seq 660 nt   +upstreamnt  +downstreamnt
atgagcgatgcgctgttcgcggtcccggcggagcccgtggaggtctcccccggcgcggtg
catgttcccggctggctgagcacggagacccagcgcaggctcgtcgaactgtgccgcgag
tggtcgcgcgggcccgctgggatgcggcggcaccggatgccgcgcgggggcatgatgagc
gtgcggatggtgtcgctgggctggcactgggagccctaccggtactccaggacgctgccc
gacggtgagcccgtggcgccgttcccgtccctgctgggtgagctcgcccgcgcgggcgtg
gccgatgcctatggcgcgcccctggcctccggcacccccgactacgacgtcgccctggtc
aactactacgacgccgacgcgaagatgggcatgcaccaggaccgcgaggagcaggccgat
gtcccggtcgtctcgctgaacctcggcgacgcgtgcgtcttccgcttcggcaacaccgaa
aaccgcagtcgcccctacaccgacgtggaactgcgcggcggcgacctgttcgtgttcggc
ggcccgtcgcggatggcctaccacggcgtgccgcgcatcctgccgggcaccgccgacccg
gatgtcggcttggcgaaggggcggctcaacatcaccatccgcgcgtccgggctggagtag

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