Nocardiopsis gilva: CDO52_15010
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Entry
CDO52_15010 CDS
T05022
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDO52_15010 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_15010 (xth)
Enzymes [BR:
ngv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CDO52_15010 (xth)
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CDO52_15010 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ASU86244
UniProt:
A0A223SDL5
LinkDB
All DBs
Position
3305091..3305885
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AA seq
264 aa
AA seq
DB search
MTISTVNVNGLRAAAKKGFVEWLAATEADVVCLQETRAERAQLAPEVIAPEGWHVVLAPA
AAKGRAGVALYTRARPEAVRVGFGAAEFDGAGRYVEADLGRVSVASLYLPSGEVGTERQA
EKERFMAAFLPYLLRRRAEVEAQGRALVVCGDWNIAHREADLKNWRNNRKNSGFLPEERA
WLSRVFDEAGYVDVVRALLPEREGPYSWWSYRGRAFDNDAGWRIDYQVATPGVAGVAKEA
RVERAAAHDLRWSDHAPVTVAYAW
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgacgatttcgacggtgaacgtgaacgggctgcgcgcggcggccaagaagggcttcgtg
gagtggctggcggccacggaggccgatgtggtgtgcctgcaggagacgcgggccgaacgc
gcccagctggcgccggaggtgatcgcgcccgaggggtggcacgtggtgctggcgccggcg
gcggccaaggggcgcgccggtgtggcgctgtacacgcgtgcgcggcccgaggcggtgcgt
gtcgggttcggtgccgcggagttcgacggtgcgggccggtatgtggaggcggacctgggg
cgggtgagtgtggccagcctgtatctgccgtcgggtgaggtgggcaccgagcgccaggcg
gagaaggagcgcttcatggcggcgttcctgccctatctgttgcggcgccgcgccgaggtg
gaggcccaagggcgtgcgctggtggtgtgcggggactggaacatcgcccaccgtgaggcg
gatctgaagaactggcgcaacaatcggaagaactcggggtttttgcccgaggagcgggcg
tggttgtcgcgggtgttcgacgaggcggggtatgtggatgtggtgcgggccctgcttccg
gagcgggagggcccgtattcgtggtggtcctatcgcgggcgggcgttcgacaacgatgcc
gggtggaggatcgactaccaggtggcgacgccgggggtagcgggtgtggccaaggaggcg
cgggtggagcgggctgccgctcatgacctgcggtggtcggaccatgcgccggtgacggtg
gcctacgcctggtag
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