Nocardiopsis gilva: CDO52_16345
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Entry
CDO52_16345 CDS
T05022
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ngv
Nocardiopsis gilva
Pathway
ngv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDO52_16345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngv02000
]
CDO52_16345
Transporters [BR:
ngv02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CDO52_16345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
Rad17
AAA
AAA_30
FbpC-like_RD
CysA_C_terminal
AAA_22
TOBE_3
TOBE
AAA_25
AAA_28
Prot_ATP_ID_OB_C
ORC-CDC6-like
NACHT
nSTAND_NTPase5
AAA_5
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ASU84149
UniProt:
A0A223S7T0
LinkDB
All DBs
Position
complement(3580183..3581256)
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AA seq
357 aa
AA seq
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MTTAADASERTGARGVPVELTGLVRSFSGVRALDGFDLHMAPGELVALLGPSGCGKTTAM
RVLAGLERADAGSVHVGGQDITHLSANRRDMGMVFQAYSLFPNMTAVDNVAFGLRLRGRG
TGERRARAGELLELVGLSAHAARYPHQLSGGQQQRVAIARALAIEPRVLLLDEPLSALDA
KVRAQLRDEIRRIQLEVGTTTLFVTHDQEEALAMADRVGVMRAGRLEQIADPGTIYARPT
TEFVADFVGLTNRVPGRAADGYAEVLGGRVPLLEGSAVGEEVTVLLRPEALELAVDATAT
ARVVASSFLGSLARVQVRLADGRLVVAQVAGSLIADLTPGTAVALTPRPVPALAATP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggctgcggacgcgtccgagcggaccggggcgcggggcgttccggtcgagttg
acggggctggtgcgctccttctccggagtgcgcgcgctggacggcttcgacctgcacatg
gcgccgggagagctggtggcgctactcggtccctcggggtgcggaaagaccaccgccatg
cgggtgctggccgggctggagcgcgccgatgcgggctcggtgcacgtgggtggccaggac
attacccacctgtccgcgaaccgccgcgacatggggatggtcttccaggcctacagcctg
ttccccaacatgacagcggtggacaacgtggccttcggcctgcggctgcgcggtcgcggc
accggcgagcgccgggcacgggcgggcgaactgctggaactggtaggcctgtcggcccac
gccgcgcgctacccgcaccagctgtcgggcggccagcagcagcgcgtggcgatcgcccgg
gcgctggccatcgagccgcgggtactactgctcgacgagccgctgtcggcactggacgcg
aaggtccgcgctcagctgcgcgacgagatccggcgcatccagctggaggtggggaccacg
accttgttcgtcacccatgaccaggaggaggccctggccatggccgaccgggtgggcgtg
atgcgtgccgggcggctggagcagatcgccgaccccggcacgatctacgcgcgtcccacc
accgagttcgtggccgacttcgtggggctgaccaaccgcgtaccggggcgcgcggccgac
ggctacgcggaggtgctgggtgggcgcgtcccactgctggaggggtcggccgtaggggag
gaggtgaccgtgctcctgcgccccgaggcgctggagctggccgtcgacgcgacggcgacg
gcgcgcgtcgtcgcgtcgagcttcctggggtcgctggcccgggtacaggtgcgcctggct
gatggccgtctggtggtggcgcaggtggccggttccctgatcgccgacctgacgcccggg
acagcggtggcgctcacgccccggccggtcccggcgctggctgcgacgccataa
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