KEGG   Nocardiopsis gilva: CDO52_17935
Entry
CDO52_17935       CDS       T05022                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
ngv  Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ngv03016]
    CDO52_17935
Enzymes [BR:ngv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     CDO52_17935
Transfer RNA biogenesis [BR:ngv03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CDO52_17935
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC Major_capside
Other DBs
NCBI-ProteinID: ASU84428
UniProt: A0A223S8K1
LinkDB
Position
3957677..3958945
AA seq 422 aa
MANVLNPKTDTPDPENPGEQDGPQAPLLSEPREGLPPVISDAARLARAVEAFAAGSGPVA
VDAERASGYRYGQRAYLVQLRREGAGSALIDPIACPDLSGLDAALDDTEMVLHAAHQDLP
CLGEVSLRPSRLFDTELAGRLLGYQRVGLGSMVERVLGMRLAKEHSAVDWSIRPLPKDWL
TYAALDVEVLVDLRDALHAELEKAGKLDWALEEFAAVLATPPKEPRPDPWRRTSGIHKVR
NQRGLGVVRELWLERDRIAQERDMSPGRVLPDSGIVEAATVMPRTAQELGAIKPFSVRLG
RRYVTTWIKAINRVRDMAQAELPQPGAPGDGPPPTNRWADRDPAAARRLEAARSTVSEIA
ERVVMPTENLLQPDLVRRLSWTPPESIDADSVAEHLRSNGARAWQLSLTAEELAAALKRA
NE
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtggcgaatgtgctgaaccccaagacagataccccggatccggagaatcccggcgaacag
gacggcccgcaggcccctctgctgagtgagccacgggaggggctcccgcccgtcatctcc
gacgcggcgcgtctcgcccgcgctgtcgaggcgttcgcggcgggaagcgggcccgtcgcc
gtcgacgccgagcgcgcctcgggctaccggtacggccagcgcgcctacttggtccagctg
cgccgggagggggcggggtcggcgctgatcgacccgatcgcgtgcccggatctgagcggc
ctcgacgccgctctcgacgacacggagatggtgctgcacgccgcccaccaggacctgccg
tgcctgggtgaggtgagcctgcggccgagtcggctgttcgacaccgagctggccggacga
ctactcgggtaccagcgcgtgggcctggggtccatggtcgaacgggtgctgggcatgcgg
ctggccaaggagcactctgcggtggactggtcgatccgaccgctgccgaaggactggctg
acctacgccgccctggatgtcgaggtcctggtggaccttcgcgacgctctgcacgcggag
ctggagaaggccgggaagctggactgggcgctggaggagttcgccgccgtgctggccacg
ccgcccaaggagccgcggccggacccgtggcggcgcacgtcgggcatccacaaggtccgc
aaccagcggggactgggtgtcgtccgggagctgtggctggagcgcgaccgtatcgcacag
gagcgcgacatgtcgccgggccgggtgctgcccgactccgggatcgtcgaggccgcgacg
gtgatgccgcgcacggcgcaggagctgggggcgatcaagccgttcagcgtgcggctgggc
cgccggtacgtcacgacctggatcaaggcgatcaaccgggtacgcgacatggcccaggcc
gagctgccccagcccggggcaccgggcgatggtccgccccccaccaaccgctgggccgac
cgcgatccggccgcggcccgccgcctggaggcggcgcggtcgacggtcagcgagatcgcc
gagcgcgtcgtcatgcccacggagaacctgctccagcccgacctcgtccggcggctgtcc
tggacgccccccgagtccatcgacgccgattcggtcgccgagcacctgcgctccaacggt
gcgcgcgcatggcagctctcgctgaccgccgaggagctggcggcagcgttgaagcgggcg
aacgagtag

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