KEGG   Nocardiopsis gilva: CDO52_19430
Entry
CDO52_19430       CDS       T05022                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ngv  Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ngv02048]
    CDO52_19430
Enzymes [BR:ngv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CDO52_19430
Prokaryotic defense system [BR:ngv02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    CDO52_19430
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD HD Helicase_C ResIII AAA_22 YqiJ_N
Other DBs
NCBI-ProteinID: ASU84683
UniProt: A0A223S9A5
LinkDB
Position
4327125..4329986
AA seq 953 aa
MTAETTDPPPDHTVFWGKTGKGSRTYSPSDWHPLAAHMVDTLHVADQLWEHYLSPALKRS
FLPGAADEELGRAAFRWVAALHDLGKAAPGFQYLSDPHFQQVTRSLPCSAGPRHMRHELM
SAQLVRTFLGELRWPDESIDWVADIVGGHHGVFPKPAFRTAMKSNDSLGDAAWRARQREL
FLFATRASGIDLDELADHVPGIGAQMAFSGAVILADWLASNDDMFGYRNGWPPGYQATSE
KTAEGFRTFMELGEVWHPAPPANAEELYATRFGIATPRGTQLLADEVARGAEHPGLMVVE
APTGEGKTEAALVAAEILAARFGFNGLFFALPTQATTNHIFDRVLDGWIHSQSPKPTIGL
AHGKAQRHARYEKLLEGIGEDENEALTASQWMRGAKRALLSPVVIGTIDQLLFAGVSAKH
VMLRHTGLANKVVVIDEVHAYDAYMSEILHRVLHWLGWHRVPVVLLSATLPSTQRDALLR
AYTGADEVEVTGAGYPQITWAPALDVEERERFGEPSDPFEAESHQPLPLKAQATTSSRGG
ELAVEFRPEPADTPEAVTALVDELVGDASPTSGRGTVLVLRNTVARAQATFAALEGRFPR
EVSLAHARFTTADRRRLDADLTQRFGPPRRDDGSGAVTENPHRPARHIVVATQVAEQSLD
VDFDVLISDLAPIDLLLQRAGRCHRHARPQPRPVGLDTPRLVVTGYTDPDGDGRELPTEG
ALPVLPTGDARPYLHHLLFRTLAHLAEHREHNGRLTVPADVPSAIEAVYGDRPLGPDAWQ
EAMGAAAEAAERHIRELAGKAGAVLIARPDLDEFGLGEVQHLGGDHNVDEDEEKVAQMLP
VRHGATSIEVILLRRVDKNTAETVSLPQAGTARRRVPLNRMPSDAEKEAILDQAIRLPLW
QVDTEKLSSPSGWKRAPWSSRLRVLLLDSSTGEAQKGNRRATYSTETGWTDIT
NT seq 2862 nt   +upstreamnt  +downstreamnt
atgaccgccgagacgactgaccctcctcccgaccacaccgtcttctggggaaagaccggc
aagggcagccggacgtattcaccctccgactggcatcccctcgccgcccacatggtcgac
acactgcacgtggccgaccagctctgggagcactacctgtcccccgccctcaagcgcagc
ttccttccgggagcggccgacgaggagctcggccgggcggcgttccgctgggtggcggcc
ctccatgacctcggcaaggccgccccggggttccagtacctcagtgacccacacttccag
caggtgacgcgctccctgccatgctccgcagggccccggcatatgcgccacgagctgatg
tccgcgcagctggtgcggaccttccttggcgaactccggtggccggacgaatcgatcgac
tgggtcgccgacatcgtcggcgggcaccacggggtcttcccgaagcccgcgttccgcacc
gcgatgaagagcaacgacagtctgggcgacgccgcctggcgcgcccggcagcgtgagctg
ttcctgttcgctacccgcgcctccgggatcgacctcgacgaactcgctgaccatgtgccg
ggcatcggcgcgcagatggcgttctccggggcggtcatcctggccgactggctggccagc
aatgacgacatgttcggctaccggaacggctggccgccggggtaccaggcgacctcggag
aagaccgccgaggggttccggaccttcatggagctgggcgaggtctggcaccccgcccct
cccgcgaacgccgaggagctgtacgccacccgcttcggcatcgccacgccgcgcggcacc
cagctcctcgccgacgaggtcgcacgcggcgccgagcacccgggactcatggtcgttgag
gctcccaccggggagggtaaaaccgaggccgcactcgtcgccgccgagatcctggcggcc
cggttcggcttcaatgggctcttcttcgcgctgccgacccaagccacgacgaaccacatc
ttcgaccgggtactcgacggctggatccactctcagagccccaagccgaccatcggcctg
gcacacggcaaggcccagcggcacgcacgctacgagaagctgctggagggcatcggcgag
gatgagaacgaggcgctcacggcctcccagtggatgcgcggcgccaagcgggcgctcctc
tcgccggtggtgatcggcaccatcgaccagctgctgttcgccggtgtctcggccaagcat
gtcatgctccggcacaccggcctggccaacaaggtcgtggtgatcgacgaggtccacgcc
tacgacgcgtacatgtcggaaatcctgcaccgcgtcttgcactggctcggctggcacagg
gtcccggtcgtgctcctgtccgcaacgctgccgagcacccagcgagacgcgctgctccgc
gcttacaccggcgccgacgaggtcgaggtcaccggagcgggttacccgcagatcacctgg
gctcccgctctggacgtcgaagagcgggaacgcttcggcgagccgtccgatccgttcgag
gcggagagccaccagcctcttccgctgaaggcgcaggccacgacgtcatcgcgaggcggt
gaactcgccgtcgagttccgccccgagcccgccgacactccggaggccgtcaccgccctc
gtggacgaactggtcggcgacgcatcaccgacctcgggccggggcaccgtactggtcctc
cgcaataccgtggcccgcgcccaggcgaccttcgccgcactcgagggacggttcccccgt
gaggtctccctcgcccacgcccggttcaccacggcggaccggcgacgactggacgcggac
ctcacccagcggttcggaccgccgcgtcgcgacgacggatccggcgccgtcacggagaac
ccgcaccggcccgcgcgacacatcgtggtcgccacccaggtcgccgaacaatcgctggac
gtcgatttcgacgtgctcatcagcgacctcgccccgatcgacctcctgctccaacgcgcc
ggccgctgccaccggcacgcccgcccgcaaccgcggccagtgggcctggacacgccccgc
ctcgtcgtcacgggctacaccgaccccgacggcgacggccgcgaactgccgacggaaggg
gccctaccggtactgccgactggcgacgcccgcccctatctgcaccacctgctgttccgc
actctggcccatctcgccgagcatcgtgagcacaacggccgactgaccgtgccagccgat
gttccctccgccatcgaggccgtctacggcgaccgtccactcggaccggacgcctggcag
gaggccatgggggcagcggcggaggcagccgaacggcacatcagggagctggcgggcaag
gcgggagccgtcctcatcgcccgccccgatctcgacgagttcggccttggcgaggtccag
cacttgggcggcgaccacaacgtcgacgaggacgaggaaaaggtcgcccagatgctcccg
gtccggcacggagcgacgagcatcgaggtcattctgctgcgtcgcgtcgacaagaacaca
gcggagaccgtctcgctgccgcaggcgggcacggcccggcggcgtgtcccgctcaaccga
atgccctcggatgccgagaaggaggccatcctggaccaggccatccgactcccgctctgg
caggtggacaccgagaagctgtccagcccatcgggctggaagcgggctccctggtcttcg
cgcctccgcgtgctgctcctcgactcgtccaccggcgaggcccagaaaggcaaccgccgc
gcaacctacagcaccgagacgggatggaccgacatcacgtga

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