Nocardiopsis gilva: CDO52_20570
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Entry
CDO52_20570 CDS
T05022
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngv03016
]
CDO52_20570
Enzymes [BR:
ngv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CDO52_20570
Transfer RNA biogenesis [BR:
ngv03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CDO52_20570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
BAR
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ASU84868
UniProt:
A0A223S9S6
LinkDB
All DBs
Position
complement(4592761..4594320)
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AA seq
519 aa
AA seq
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MSQSRTYEVRTYGCQMNVHDSERLSGLLEDAGYQRAAEGSTADIVVFNTCAVRENADNRL
YGNLGHLRPVKDAHPGMQIAVGGCLAQKDRGEIVRRAPWVDVVFGTHNIGSLPTLLERAR
IGREAQVEIEESLETFPSTLPTRRESAYAAWVAISVGCNNTCTFCIVPALRGKEKDRRPG
DILAEVRALVAEGAIEVTLLGQNVNAYGSEFGDRQAFSKLLRACGEIEGLERVRFTSPHP
RDFTDDVIDAMAETPNVMPQLHMPLQSGSSKVLKAMRRSYRQERFLDIVRRVREKMPEAA
ITTDIIVGFPGETEEDFQETLHVVREARFAAAFTFQYSKRPGTPAATMDGQLPKEVVQER
YERLVELQESISAEENRKLVGREVEVLVAEGEGRKDGDRRRLSGRAADNRLVHFATSLRG
ANSEHSATSLRGANSEHSSTEEGDNAPRPGDLVTVEVTYAAPHHLVADSGVRSLRRTRAG
DAWAARNGQQQEQPGVLLGMPKVGVPAAEPAAAGGCCDA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgagccagagtcgtacctacgaagtgcggacctacggctgccagatgaacgtccacgac
tccgagcgcctatccggtctgctggaggacgcggggtaccagcgcgcagccgagggcagc
accgcagacatcgtcgttttcaatacctgtgcggtccgcgagaacgcggacaaccgcctc
tacggcaacctcgggcacctgcgccccgtcaaggacgcccaccccggcatgcagatcgcc
gtgggcgggtgcctggcgcagaaggaccgtggcgagatcgtccgccgtgccccgtgggtc
gacgtcgtgttcggtacgcacaacatcgggtcgctgccgaccctgctggagcgcgcccgc
atcgggcgcgaggcgcaggtggagatcgaggagtcgctggagaccttcccctccaccctg
cccacccgccgcgagtccgcctacgcggcgtgggtcgcgatctcggtcggctgcaacaac
acctgcaccttctgcatcgtgcccgccctgcgcggcaaggagaaggaccgccgccccggc
gacatcctcgccgaggtgcgggcgctggtcgccgagggcgccatcgaggtgacgctgctc
ggacagaacgtcaacgcctacggcagcgagttcggggaccgccaggcgttctccaagctg
ctgcgcgcctgcggcgagatcgagggcctggagcgcgtccgcttcacctcaccgcacccg
cgcgacttcaccgacgacgtcatcgacgcgatggccgagactccgaacgtcatgccccag
ctgcacatgccgctgcagtccgggtcgagcaaggtgctcaaggcgatgcgccgctcctac
cgccaggagcgcttcctcgacatcgtgcgccgcgtccgggagaagatgcccgaggcggcg
atcaccaccgacatcatcgtgggcttccccggcgagaccgaggaggacttccaggagacg
ctgcacgtcgtgcgcgaggcgcgcttcgcggcggcattcacgttccagtactccaagcgg
cccggcaccccggcggccaccatggacggccagctgcccaaggaggtcgtgcaggaacgc
tacgagcgcctcgtcgaactgcaggagtccatctccgccgaggagaaccgcaagctcgtc
ggccgcgaggtcgaggtcctggtcgccgagggcgagggccgcaaggacggcgatcggcgc
cggctctccggccgggcagcggacaaccgcctggtccacttcgcgacgagcttgcgagga
gcgaacagcgagcacagtgcgacgagcttgcgaggagcgaacagcgagcacagttcgacg
gaagagggcgacaacgcgccccgccccggtgacctcgtcaccgtcgaggtcacctacgcc
gcgccgcaccacctggtggccgactccggtgtgcgttcgctgcgccgcacccgcgccggc
gacgcctgggccgcgcgcaacggtcagcagcaggagcagcccggtgtactgctgggcatg
cccaaggtcggtgtcccggcggccgagcccgccgcggcgggcggttgctgcgacgcctga
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