Nocardiopsis gilva: CDO52_20680
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Entry
CDO52_20680 CDS
T05022
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngv03009
]
CDO52_20680 (rimO)
Enzymes [BR:
ngv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CDO52_20680 (rimO)
Ribosome biogenesis [BR:
ngv03009
]
Prokaryotic type
ribosomal protein modification factors
CDO52_20680 (rimO)
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
ASU84885
UniProt:
A0A223S9S1
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Position
complement(4621130..4622611)
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AA seq
493 aa
AA seq
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MSSRRTVSLVTLGCARNEVDSEELAGRLSAGGWDLLDAESDEKADVVVVNTCGFIEAAKQ
DSIEALLDSAEEGTKVVAAGCMAERYGSQLAEALPEAEVIGFDDYAEISERLDDVLEGRE
LAPHSPRDRRTLLPISPVERPGAETHVPGHAEFEPLPEGIAPASGPRIPRRRLTGGPVAN
LKIASGCDRRCTFCAIPAFRGAYISRQPDDIVREAEWLAGEGVRELFLVSENSTSYGKDL
GDLRALEKLLPRLAAVEGIERVRVSYLQPAEVRPGLIDVLTSTPGVVPYFDLSFQHASGP
LLRRMRRFGDRERFLELLETARKAVPQAGARSNFIVGFPGESEEDFEELVAFLESARLDA
IGVFGYSDEDGTEAADFEGKLPDDVVAERVDRLNRLAEELMAQRSEERVGTTVEVLIEAE
LDDGTYEGRAAHQAPEVDGSTIVHGEGLKVGDLVPATVTAAMGADLVAEAEVVAETEGRN
AAADDTLDTPDTQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgccgtactgtttcgctcgtcaccctggggtgcgcgcggaatgaggttgat
tccgaagaactcgccgggcggctctcggccggcggctgggacctgctcgacgccgagagc
gacgagaaggccgacgttgtcgtcgtgaacacctgcgggttcatcgaggccgccaagcag
gactccatcgaggctctgctcgactccgccgaggaggggacgaaggtcgtcgccgcgggc
tgcatggcggagcgctacggctcccagctcgccgaggccctgcccgaggcagaggtcatc
gggttcgacgactacgcggagatctccgagcgcctcgacgacgtcctggaggggcgcgag
ctcgccccgcactcgccccgcgaccggcgcacgctgctcccgatctccccggtggaacgg
cctggggccgagacccacgttcccgggcacgccgagttcgaaccgctgcccgagggcatc
gcgcccgcgtccgggccgcgcatcccgcgtcggaggctgaccggcggcccggtggccaac
ctcaagatcgcctccggctgcgaccgccgctgtaccttctgcgccatccccgccttccgc
ggtgcctacatctccaggcagcccgacgacatcgtgcgcgaggccgagtggctggccggc
gagggcgtccgcgaactcttcctggtcagcgagaactccacctcctacggcaaggacctg
ggcgacctgcgggccctggagaagctgctgccgcgcctcgccgcggtcgaggggatcgag
cgcgtccgcgtcagctacctgcagcccgccgaggtgcgcccgggcctgatcgacgtgctg
acctccacacccggcgtcgtgccctacttcgacctctccttccagcacgccagcggccca
ctgctgcgtcggatgcggcgcttcggcgaccgggagcgcttcctggaactgctggagacc
gcccggaaggcggtgccgcaggccggtgcccgctcgaacttcatcgtcgggttccccggc
gagagcgaggaggacttcgaggagctggtggccttcctggagtcggcccggctcgacgcc
atcggtgtcttcggctactccgacgaggacggcaccgaggccgccgacttcgagggcaag
ctgcccgacgacgtcgtcgccgagcgcgtcgaccgcctcaaccggctcgccgaggagctc
atggcccagcgctcggaggagcgcgtcggaaccaccgtggaggtgctcatcgaggccgaa
ctggacgacggcacctacgagggccgtgccgcgcaccaggcgcccgaagtggacggcagc
acgatcgtgcacggcgagggtctgaaggtcggcgatctggttccggcgaccgtgaccgcg
gcgatgggcgccgacctggtggcggaggctgaggtagtggcagagacagagggccggaac
gcggcggccgacgacaccctggacaccccggatacgcaatga
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