Nocardiopsis gilva: CDO52_23690
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Entry
CDO52_23690 CDS
T05022
Name
(GenBank) hypothetical protein
Organism
ngv
Nocardiopsis gilva
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PT-HINT
TEN_YD-shell
Hom_end_hint
Hint
DUF1451
Motif
Other DBs
NCBI-ProteinID:
ASU85399
UniProt:
A0A223SBK4
LinkDB
All DBs
Position
complement(5412455..5419723)
Genome browser
AA seq
2422 aa
AA seq
DB search
MALVMAIGLLSVMPASAIAYNHRPDAPDEASIAGSDASVNVAPADDETEKAALTELPDAE
WPEPETIEIPAGGSEASSGGAEPVVSAKALPEKEAEEWESPLPEADDQPQEKRGAEETDE
APSERRDAVRSPGPDSAAVQSSPTPEPSPEADSPSEQESGQEPDTPSEQPRQPEPAPERE
PAADGDPEPSQEDATEDEPSAEPSALTAVEGADLEILDREAAEKAGVSGLLLRLKRTDGS
DSDGPVEVSVDYSDFATAFGADYGSRLRLVAVDECVLEQGGCPGDAPDVVELDSENNADA
QTVTAVAPASAGTDVPEPGAYRSALAPTAPSGGGSGTLLALAAAPTGGTGDYSATPLQAS
STWSVGEQTGDFTWSYPMETPGVAAGESPEIGLSYSSQSVDGRTASSNNQTSWVGEGFSY
DAGYIERRYKACMQDGQAEGSKTGDQCWGRHNATMSLNGTSTELIIDKDGDWHPRNDDGS
RIERLTGAKNGDNDGEYWRVTTTDGTQYYFGRNRLPGWSKGKPETKSTWTVPVYGNDSGE
PCHASSFADSWCQQAYRWNLDYEVDVHGNVTTYYYDKYTDYYGRNVKTEATPYTRAGNLN
RIEYGLRSDDVFAKAPARVKFTVGERCIPSKDFDCAPKKRTEANAKHWPDVPTDQECKKD
EKCVGKHSPSFWSTKKLDKVTTEVYDGSGYKPVDSWKLEHSYPKPGDGTDPALWLKSVTH
TGHVGGTETMPKVVFHGQAMENRVDSTRDGPAPMLKYRITSVSNETGGRVHVEYSAPECT
AGSTPKPDKNTKRCYPVIWTPEGEEELTDWFHKYVVTRVTEEDLVGGQPDVVTSYEYLGG
GAWHFDDADGLVPEKQKTWSQWRGYERVKVREGHPDDTRSETEYLFYRGMDGDKLSSGKR
SVKITDSEGGTDTDHDAFNGQTREVIERNGPGGEVISKEISIPWKKQTAERKYKWGTLRS
YHTDTQSERTYTPLEGGKQRVTLTDSTFDEYGFLSRIDDHGDVSDPDDDQCVRVSYARNT
DKWLIALQSREEVLSVKCGEKPTYPDDVISDERILYDGKGFGEKPTRGLVTKAQELEDYD
GDTPKYLTISQGTYDKYGRQVTDTDAAGNVSKTSYSSDVPGGPETEIANTNVLGHTTTVR
MDPLRSSLVSETDANGNRTDLAYDPLGRMTSVWLADRDKEKNKERPSAKFEYNIRADAPS
SVVTYELNNRGDYVASYEIYDGMLRPRQQQSPGIDGRLISEVFYDSRGNVVLEREAYPNG
EEPSDKLFVVNNEDEIPRQTESVYDGAGRQTATVQRSRGKEVLRTSVQELGDRTLVTVPA
GDTATTTLYDARGRMTEMRQHHGNKPEGKYDATKYTYTKADELATVTDPAGNVWKYRYDL
RGRQIKTVDPDAGTTTFKYDELDQLVSQTDGRGRTLAYTYDELGRQTGVFEDSPKGTQRV
GMVYDTVQKGQLSSATRYSGNSAYTQRVLKYNKLYQPLMTEISIPESEGVLSGKYRFATD
YNPDGSTQSVVLPKAGKLPRELVQYHYNELGMPTMVQAGRDKVVSEAKFSKIGELVQREF
HKGNSGAKKTWATYDYDRRTGRLSSISTVPEIGSGSLSHQSYTYDDAGNVLSISDKPTAE
GLASDTQCFAYDGLRRLTEAWTSKPGEDDDKKSCAEKPSADALGGAAPYWHSYAYDKVGN
RLTETKHSASSSGDTVRTYTHPDPGKLQPHALTKVEETGPEGDRLEKYGYDESGNMTSRL
TAEHDQNLEWDAEGNLVKVTEGDQATSYTYDANGQRLLRRDAQSSTLYLPGMELRFDAAE
QKTEATRYYEHAGETVAMRENDGSLHWLISDHHGSGQLAIDASTGEAVQRRFTPFGEERS
STGEWPGEKGFVGGTIDASTGLTQLGARAYDAAIGRFISVDPVMDPTDAQQMHGYVYSNN
NPVTWSDPSGMFLDKAWNWTKSKVKKGVKKAKKVYNKGKKYVKRQYKKVKKYVKKKYHQA
KRYVRKKYHQARRYVRRAYHKTKSYVKRAYRATSSFVRRHKNTIIATGAGIAVGAACSVA
TAGAGTIGCAALGGAVSGLVQYQLDTPKEQWSVTDALTSTALGGAFGAAGGALGGKVASA
ASSKIGSMFSSGASRAGAGGGRSGLSSKLSGFFSRSKGGGAARNGPTGCNSFVPGTGVLM
ADGSKKPIEDVDVGEKVIATDPETGEQSEKTVLATIIGQGSKDLVEITVDTSTEKPAEAE
LGPDAGGLNGNGGMPGPLAGGDIIIATEAHPFWVPELGEWLDAGDLRPGMWLETSSGTWV
QVTATRAWTQSAKVHNLTVEGIHTYNVAVGASSDVLTHNCGGLDALSRSGMRPDKNNLTR
AGREYQKHMGRGDLPKVSGKEFDSAGQSLLDDILTHPSSAVSPVTSGGFRGGTRHIMPDS
AGGRGFGATFDSSGLFQYFGRY
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
gtggccctggtcatggccatcggtctgctgtccgtcatgccggcgtccgccatcgcctac
aaccaccgtccggacgctcccgacgaggcctccatcgcgggcagcgacgcgtccgtgaat
gtggcccccgctgacgatgagaccgagaaggcagcgctcaccgagctgccggacgccgag
tggccggagccggagacgatcgagattccggcgggcggctccgaggcatccagcggtggc
gccgagccggtggtctccgcgaaggcgctgcccgagaaggaggccgaagagtgggagtcc
ccgctccccgaggccgacgaccagccccaggagaagcgcggggcagaggagacggacgag
gccccgtccgagcggcgcgacgccgttcggtctccgggccccgacagcgcggccgtgcag
tcctctcccacccccgagccctcgcctgaggcggactcgccgtcggagcaggagagcggg
caggaacccgacacccccagcgagcagccgcggcagccggagcccgcaccggaacgggaa
cccgccgcggacggcgacccggaaccgtcccaggaggacgcgaccgaggacgagccgtcc
gccgaaccctccgcgctgacggcggtcgagggcgccgacctggagatccttgaccgcgaa
gcagcggagaaggcgggcgtctccggactgctgctgcgcctgaagcgcaccgacggcagc
gactccgacggaccggtcgaggtctccgtcgactactccgacttcgcgaccgccttcggc
gccgactacggctcccggctgcgcctcgtcgccgtggacgaatgcgtgttggagcagggc
ggctgccccggcgacgcacccgacgtggtcgagctggactcggagaacaacgccgacgcg
cagacggtgaccgccgtggcgcctgccagcgccgggacggatgtgcccgagccgggggcc
taccggtccgcgctcgcgccgaccgcacccagcggcggaggcagcggcacgctgctcgcc
ctggccgccgcccccaccggcggtaccggcgactactccgcgaccccgctgcaggcgtcg
tccacgtggagcgtgggggagcagaccggtgacttcacctggtcgtacccgatggagacc
cccggcgtcgcggccggggagtcccccgagatcgggctgagctactcctcgcagagcgtc
gacggccgcaccgcgtcgtccaacaaccagacctcctgggtcggcgaggggttcagctac
gacgccggatacatcgagcgccgctacaaggcgtgcatgcaggacggtcaggccgaggga
tccaagaccggcgaccagtgctggggacgccacaacgccaccatgtccctcaacgggacg
tcgaccgagctgatcatcgacaaggacggagactggcacccgcgcaacgacgacggctcc
aggatcgagcggctgaccggcgccaagaacggcgacaacgacggcgagtactggcgcgtc
accaccaccgacggcacccagtactacttcggccgcaaccgcctgcccggatggtcgaag
ggcaagccggagaccaagtccacctggaccgtgcccgtctacggcaacgactccggggag
ccgtgccacgcgtcgtcgttcgccgattcctggtgccagcaggcctaccggtggaacctc
gactacgaggtcgacgtgcacggcaacgtcaccacgtactactacgacaagtacaccgac
tactacggccgcaacgtcaagaccgaggcgacgccctacacccgcgcgggcaacctcaac
cgcatcgagtacgggctgcgctccgacgacgtcttcgccaaggccccggcccgggtgaag
ttcaccgtcggcgagcgctgcatccccagcaaggacttcgactgcgcgcccaagaagcgc
accgaggccaatgccaagcactggccggacgtccccaccgaccaggagtgcaagaaggac
gagaagtgcgtcggaaagcactcgccgtccttctggtcgaccaagaaactggacaaggtc
accaccgaggtctacgacgggagcggctacaagccggtcgactcgtggaagctcgaacac
tcctacccgaagccgggtgacggcaccgacccggcgctgtggctgaagtccgtcacccac
accgggcacgtcggcggcacagagacgatgccgaaggtggtcttccacggccaagccatg
gagaaccgggtcgactccacccgtgacgggcctgctccgatgctgaagtaccggatcacc
tcggtctccaacgagaccggtgggcgggtgcacgtcgagtactccgcgccggagtgcacg
gcgggctccacacccaagccggacaagaacaccaagcgctgctacccggtgatctggaca
cccgagggcgaggaggagctcaccgactggttccacaagtacgtcgtcacgcgggtcacg
gaggaggacctggtcggcgggcagcccgacgtcgtcacctcctacgagtacctcggcggc
ggcgcctggcacttcgacgacgccgacggcctggtccccgagaagcagaagacctggtcg
cagtggcgcgggtacgagcgcgtcaaggtgcgcgaggggcacccggacgacacccgctcg
gagaccgagtacctcttctaccggggcatggacggcgacaagctgtcgtccggcaagcgg
tcggtgaagatcaccgactccgaagggggcacggacaccgaccatgacgccttcaacggt
caaacgcgcgaagtcatcgagcgcaacggccccggcggtgaggtgatctccaaggagatc
agcatcccgtggaagaagcagaccgccgagcgcaagtacaagtgggggaccctgcgctcg
tatcacaccgacacgcagtcggagcggacctacacccctctcgaaggcgggaagcagcgc
gtcacgctcaccgacagcaccttcgacgagtacgggttcctgagccgcatcgacgaccac
ggggacgtgtccgaccccgacgacgaccagtgcgtccgggtctcctacgcacgtaacacc
gacaaatggctgatcgcgctgcagtcccgtgaggaggtgctgtcggtcaagtgcggcgag
aagcccacgtacccggacgacgtgatctccgacgagcggatcctgtacgacggcaaggga
ttcggtgagaagcccacgcgcgggctcgtcaccaaggcccaggagctcgaggactacgac
ggggacacccccaagtacctgacgatctcgcagggcacctacgacaagtacgggcgccag
gtgaccgacaccgacgcggccgggaacgtctcgaagacctcgtactcctccgacgtgccc
ggcggcccggaaacggagatcgccaacaccaatgtgctcgggcacaccacgaccgtgcgc
atggacccgctgcgctcgtcgctcgtctcggagaccgacgccaacgggaatcgcaccgac
ctcgcctacgacccgctcgggcggatgacctcggtctggctcgccgaccgggacaaggag
aagaacaaggagcggccgagcgcgaagttcgagtacaacatccgggccgacgcgccctcc
agcgtcgtcacctatgagctcaacaaccgcggggactacgtcgcgagttacgagatctac
gacggcatgctgcgcccgcggcagcagcagagccccggtatcgacgggcggctgatcagc
gaggtcttctacgactcgcggggcaacgtcgtcctggagcgggaggcctacccgaacggc
gaggagcccagcgacaagctgttcgtcgtcaacaacgaggacgagatcccgaggcagacc
gagtcggtctacgacggagcggggcggcagaccgccaccgtccagcggtcgcgcggcaag
gaggtgctgcgcaccagcgtccaggaactgggtgaccggaccctggttacggtcccggcg
ggcgacactgccacaaccaccctctacgacgctcgcgggcgcatgaccgagatgcggcag
caccacgggaacaagcccgaaggcaagtacgacgccacgaagtacacctacacgaaggcg
gatgagctcgccacggtgaccgacccggcgggcaacgtctggaagtacaggtatgacctt
cgggggcggcagatcaagacggtcgaccccgacgctggaaccacgaccttcaagtacgac
gaactcgaccagctggtgtcgcagaccgacggtcgcggccggaccctcgcctacacctac
gacgagctggggcgccaaaccggggtcttcgaggactccccgaaggggacgcagcgcgtc
gggatggtctacgacacggtgcagaaggggcagctcagctccgcgacccgctatagcggc
aatagcgcctacacccagcgggtgctgaagtacaacaagctgtaccagccgctgatgacc
gagatcagcatcccggagagcgagggggtgctctccgggaagtaccggttcgccaccgac
tacaaccccgacggctccacgcagagcgttgtgctgcccaaggcgggcaagctgccgcgc
gagctggtgcagtaccactacaacgaactcggcatgcccacgatggtgcaggccggtcgc
gacaaggtcgtcagcgaggccaagttctccaagatcggcgagctggtccagcgtgagttc
cacaaggggaacagcggggcgaagaagacctgggcgacctacgactacgaccggcggacc
ggcaggctgtcgtctatcagcaccgtccccgagatcgggtccgggtcgctgagccaccag
agctacacgtatgacgacgcgggcaacgtcctgagcatcagcgacaagcccacggcggag
ggactggcaagcgacacgcagtgcttcgcctacgacggcctgcgccgtctcaccgaggcg
tggacctccaaaccaggagaggacgacgacaagaagtcctgtgcggagaagccgtcggcc
gacgcactgggcggcgctgcgccctattggcactcgtacgcctacgacaaggtcggcaac
cgactgacggagaccaagcactccgcgtccagcagcggtgacaccgtccgtacctacacc
caccccgacccggggaagctgcagccgcacgcgctcaccaaggtcgaggagaccgggcct
gagggcgaccggttggagaagtacggctacgacgagtcgggcaacatgaccagccgactc
accgcggagcacgaccagaacctggagtgggacgcggaggggaacctggtcaaggtcacc
gagggcgaccaggcgaccagctacacctatgacgccaacggccagcgcctgctgcgccgc
gacgcgcagtcgtcgacgctttacctgccgggaatggaacttcggttcgacgccgcggag
cagaagaccgaggcgacccgctactacgagcacgcgggcgagacggtcgcgatgcgcgag
aacgacgggtcgctgcactggctgatctccgaccaccacggcagcggccagctcgcgatc
gacgcttcgacgggcgaggccgtccagcggcggttcaccccgttcggcgaggagcgctcg
tcgaccggcgagtggccgggtgagaagggcttcgtcggcggcacgatcgacgcgtccacc
ggcctcacccaactgggcgcccgcgcctacgacgcggcgatcggccggttcatctcggtc
gacccggtgatggacccgaccgacgcccagcagatgcacggctacgtgtactccaacaac
aacccggtcacctggagcgacccgtcggggatgttcctcgacaaggcctggaactggacc
aagagcaaggtcaagaagggagtgaaaaaggctaagaaggtctacaacaagggcaagaag
tacgttaagcgccagtacaagaaggtcaagaagtacgtcaagaagaagtaccaccaggcg
aagcgctacgtccggaagaagtaccaccaggccagaagatatgtccgccgcgcctaccac
aagaccaagagttatgtgaagcgcgcgtatcgcgccacgtcatccttcgtccgtcgacat
aagaacaccattatcgcaacgggcgccggaatcgcagtcggcgccgcctgctcggtggcc
accgccggagccggaaccatcggctgcgcagccctcggcggcgcggtctccggcctggtc
caataccaactggatacccccaaggagcaatggagcgtcaccgacgccctaacatccacg
gcattgggcggcgccttcggcgcagccggcggtgccctcggcggcaaggtcgcgtcggca
gcctccagcaagatcgggtcaatgttcagcagcggcgccagccgcgctggggctggcggt
ggccgctcggggctgtccagcaagctctctggcttcttctcccgtagcaagggcggcggg
gccgcccgcaacgggccaaccgggtgcaacagctttgtccccggcactggcgttctgatg
gccgacgggtcgaagaagccgatcgaggatgtcgacgtcggcgagaaggtcatcgcgact
gaccccgaaacgggagaacagtcagagaagacggttctggccaccatcatcggccaaggg
tcgaaagacctggtcgagatcacggtcgacaccagcacagagaagcctgcggaagctgag
ctcggccctgacgccggcggcctcaacggaaacggcggtatgcctggcccgctggctggt
ggtgacatcatcatcgccacggaggcgcaccccttctgggtccccgagctgggcgagtgg
ctggacgcaggcgacctgcgtccgggcatgtggctggagacttcttccggtacgtgggtc
caggtcaccgcgacccgagcttggactcaatccgcgaaggtccataacctcacggttgag
ggcatccacacctacaacgtcgctgtcggcgcttcgagtgacgtcctcacccacaactgt
ggcgggctggacgccttgtcgcgaagtggaatgaggcccgataagaataacttgaccagg
gctggtcgggagtatcagaagcacatgggccgaggggatcttcctaaggtaagcggtaag
gagtttgactctgctggtcagagccttctggatgatattctgacacatccgagtagtgcg
gtatctcctgtgacgtcaggcggatttcgtggagggactcgtcacatcatgccggatagc
gctggcggcagagggttcggggcaaccttcgattccagtggattgttccagtactttgga
cgctactaa
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