Nocardiopsis gilva: CDO52_25840
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Entry
CDO52_25840 CDS
T05022
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ngv
Nocardiopsis gilva
Pathway
ngv03030
DNA replication
ngv03430
Mismatch repair
ngv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDO52_25840
03430 Mismatch repair
CDO52_25840
03440 Homologous recombination
CDO52_25840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngv03032
]
CDO52_25840
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_25840
Enzymes [BR:
ngv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDO52_25840
DNA replication proteins [BR:
ngv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDO52_25840
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDO52_25840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASU85769
UniProt:
A0A223SCM5
LinkDB
All DBs
Position
5911321..5912166
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AA seq
281 aa
AA seq
DB search
MRNRYPGTCTTCGTGVAAGDGVVLKEGGRWRTYCAEHEPRPTPPPRGDHLGWHTGDLAGY
DCETSSNDPRAAFLVSAALMLPSGATRTWLADPGDREIPQDAIAIHGITNERARAEGAPA
EEVLAEIAESLAEHLLAGRGLVIFNAPFDLGVLTGELRRHGLKSLAERLSGEPCPIIDPL
VIDRGIDPYRRGPRNLAAMCAYYGVDPGDAHTAHGDAAACLALAREIGARHPDIAALSLT
DLHARQVEWAAAYARSRQEWLDRSRPGHGRVIDGSWPSTAE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaccgctatccgggaacctgcaccacctgcggtaccggtgtcgccgcgggggac
ggcgtcgtcctcaaggagggcgggcggtggcgcacctactgcgccgagcacgagccccgc
cccactccgccgccgcgcggcgaccacctgggctggcacaccggcgacctcgccggatac
gactgcgagacctcctcgaacgacccgcgtgcggcgttcctcgtctccgcggcgctgatg
ctgccctccggcgccacccgcacctggctggccgaccccggcgaccgggagattccgcag
gacgccatcgccatccacggcatcaccaacgagcgcgcgcgggccgagggcgcgcccgcc
gaggaggtgctggcggagatcgccgagtccctcgccgagcacctgctcgccggtcgcggc
ctggtgattttcaacgcaccgttcgacctcggcgtcctcaccggtgagctgcgccgccac
gggctgaagtccctggcggagcggctgtccggggaaccctgcccgatcatcgacccgctg
gtcatcgaccgcggcatcgacccgtaccggcgcgggccgcgcaacctcgcggcgatgtgc
gcctactacggcgtggatccgggcgacgcccacacggcccatggcgatgccgccgcctgt
ctcgccctggcccgcgagatcggcgcgcgccacccggatatcgccgcgctgagcctgacc
gacctgcacgcccggcaggtcgagtgggccgccgcctacgcgcgcagccgccaggagtgg
ctcgaccgcagcaggcccggccacggccgggtgatcgacggcagttggccgtcaacggcc
gagtaa
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