Nocardiopsis gilva: CDO52_25905
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Entry
CDO52_25905 CDS
T05022
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ngv
Nocardiopsis gilva
Brite
KEGG Orthology (KO) [BR:
ngv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngv03032
]
CDO52_25905 (topA)
03400 DNA repair and recombination proteins [BR:
ngv03400
]
CDO52_25905 (topA)
Enzymes [BR:
ngv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDO52_25905 (topA)
DNA replication proteins [BR:
ngv03032
]
Prokaryotic type
DNA Topoisomerases
CDO52_25905 (topA)
DNA repair and recombination proteins [BR:
ngv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDO52_25905 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASU85780
UniProt:
A0A223SCF3
LinkDB
All DBs
Position
complement(5926299..5929154)
Genome browser
AA seq
951 aa
AA seq
DB search
MPPTKGSAGKNGSKDTGRQGGGNRLVIVESPAKAKTIAGYLGPGYVVESSIGHIRDLPTK
AAEIPARYKGEPWAKLGVNVDHEFEPLYVVHAEKKSHVKRLKELVAEADELLLATDEDRE
GEAIAWHLLEELKPKIPVKRMVFNEITRDAIRNAAENTRDLNLRLVDAQETRRILDRLYG
YEVSPVLWKKVMPKLSAGRVQSVATRLVVERERERIAFTSAEYWGLKSVFDAVDAVGGVD
PSTFTANLVSVDGARVAQGRDFTSRGELRSSKGILHLDEEAARGLAERLVSAEFSVGSVE
RKPYKRSPYAPFRTTTMQQEASRKLGFSSKQTMQVAQRLYENGFITYMRTDSTTLSDSAI
AAARDQVTRLYGADYLPPKPRLYAGKVKNAQEAHEAIRPAGDSFRTPAETGLTGAEFRLY
ELIWKRTVASQMKDAVGESVTVKIHGTSTSGEQAEFSATGKIITFHGFLKAYVEGADDPN
AELDDRERRLPPVDEGDPLKALSIEAEGHTTRPPARYTEATLIKELEEREIGRPSTYTPT
IGTILDRGYVFKKGSALVPSFLAFAVVQLLERHFGNLVDYEFTARMEDALDAIARGEAER
VPWLRRFYFGEEQETGLKELVGDQLGEIDPKEVSSFPLPDSDIVMRVGRYGPYMEWDGRR
VNVPEDMAPDELTKEKAEELFAQPSGDRELGTDPETGRMIVAKSGRFGPYVTEVLEEPEP
AAEGETKPKSKAKSKASAPKPRTSSLFKSMSLETVTLEDALRLLSLPRVVGEIDDEQVTV
QNGRFGPYLKKGTDSRSLETEDQIFTVTIEKAKELFAQPKQRGRRAAAAPPLRELGEDPD
TGKPMVVKDGRFGPYVTDGETNASLRKGDEVESITDERAAELLADRRAKAPAKKTTAKKS
TTKKAAAKSTAKSTTKSTTKSTTKKSATATKTAAKKSTATKNGSATSNSAE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
gtgccacccacgaagggcagcgccggtaagaacggctcgaaggacactggacgccaagga
ggcggcaaccggctcgtcatcgtcgagtcgccggccaaggccaagaccatcgccggttat
ctgggcccggggtacgtcgtcgagtccagcatcggccacatccgcgacctgccgaccaag
gcggccgagatcccggcccgctacaagggtgagccgtgggccaagctcggggtgaacgtc
gaccacgagttcgagcccctctacgttgtgcacgcggagaagaagtcgcatgtcaagcgg
ctcaaggagctggtggccgaggccgacgagctcctcctcgccacagatgaggaccgcgag
ggcgaggccatcgcctggcacctgctcgaagagctcaagccgaagatcccggtcaagcgc
atggtgttcaacgagatcacccgcgacgccatccgcaacgccgccgagaacacccgcgac
ctcaacctgcgcctcgtcgacgcccaggagacccgccgcatcctcgaccgcctctacggc
tacgaggtctccccggtgctgtggaagaaggtcatgccgaagctgtcggcgggccgcgtg
cagtcggtggccacccgtctggtggtcgagcgcgagcgtgagcgcatcgccttcacctcg
gccgagtattggggcctgaagtcggtcttcgacgccgtggacgccgttgggggtgtcgac
ccctcgactttcaccgccaacctcgtgtcagtcgacggcgcccgtgtggcgcagggccgc
gacttcacgtcgcggggcgagctgcgctcgtccaagggcatcctccacctagacgaggag
gccgcccggggcctggccgagcgcctggtcagcgccgaattctcggtcggttccgtggag
cgcaagccctacaagcgctcgccctacgccccgttccgcaccaccaccatgcagcaggag
gcctcgcgcaagctcggcttctcctcgaagcagacgatgcaggtggcccagcgcctgtac
gagaacgggttcatcacctacatgcgtaccgacagcaccacgctgtcggacagcgccatc
gccgccgcccgcgaccaggtcacccggttgtacggcgccgactacctgccgcccaagccc
cgcctgtacgcgggcaaggtgaagaacgcccaggaggcgcacgaggccatccgccccgcg
ggggacagcttccgcacccctgccgagaccggcctgaccggcgcggagttccggctttac
gagctcatctggaagcgcaccgtcgcctcccagatgaaggacgccgtcggcgagtccgtg
accgtgaagatccacggcacctccacctcgggtgagcaggccgagttcagcgccaccggc
aagatcatcaccttccacggcttcctcaaggcctacgtcgagggtgccgacgaccccaac
gccgagctggacgaccgcgagcggcgcctcccgccggtcgacgagggcgacccgctcaag
gcgctgagcatcgaggccgaggggcacacgacccgaccgccggcgcgctacaccgaggcc
accctgatcaaggagctggaggagcgcgagatcggccgcccctccacctacacccccacc
atcggcaccatcctcgaccgcggatacgtgttcaagaagggctcggccctggtgccgtcc
ttcctggcgttcgccgtggtgcagctgctggagcggcacttcggcaacctggtcgactac
gagttcaccgcccgcatggaggacgcgctggacgccatcgctcgaggcgaggccgagcgc
gtgccctggctgcgccggttctacttcggcgaggagcaggagaccgggctgaaggagctg
gtcggcgaccagctcggggagatcgaccccaaggaggtcagctccttcccgctgcccgac
agcgacatcgtgatgcgcgtcggtcgctacggcccctacatggagtgggacgggcggcgc
gtcaacgtccccgaggacatggcgccggacgagctcaccaaggagaaggccgaggagctg
ttcgcccagcccagcggcgaccgcgagctcggcaccgacccggagaccgggcgcatgatc
gtcgccaagagcgggcgcttcgggccgtacgtgaccgaggtcctggaagagccggagccc
gccgccgagggtgagaccaagcccaagagcaaggcgaagtccaaggcctcggcccccaag
ccgcgcacgtcctcgctgttcaagtcgatgtcgctggagaccgtcaccctggaggacgcg
ctgcggctgctgtcgctgccgcgcgtggtcggcgagatcgacgatgagcaggtcaccgtg
cagaacggccggttcggcccgtacctgaagaagggtaccgacagccgctccctggagacc
gaggaccagatcttcacggtcaccatcgagaaggccaaggagctgttcgcccagccgaag
cagcggggccgccgcgctgccgccgccccgccgctgcgggagctcggcgaggatccggac
accgggaaaccgatggtggtcaaggacggccggttcggtccgtacgtgaccgacggcgag
accaacgcctccctgcggaagggcgacgaggtcgagtcgatcaccgacgagcgcgccgcc
gagctgctcgccgaccgccgcgccaaggccccggcgaagaagaccaccgcgaagaagagc
acgacgaagaaggcggcggccaagtcgaccgcgaagtcgaccaccaagtcgaccaccaag
tcgaccaccaagaaatccgcgaccgccacgaagacggccgcgaagaagagcaccgcgacg
aagaacgggtcggccacgtcgaacagcgcggagtag
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