Nitrobacter hamburgensis: Nham_0106
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Entry
Nham_0106 CDS
T00348
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nha
Nitrobacter hamburgensis
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nha03016
]
Nham_0106
Transfer RNA biogenesis [BR:
nha03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Nham_0106
Prokaryotic type
Methyltransferases
Nham_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AAA_18
AAA_28
GTP_EFTU
ABC_tran
Arf
TniB
AAA_16
SRPRB
AAA_22
AAA_35
AAA_29
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ABE61007
UniProt:
Q1QRZ0
LinkDB
All DBs
Position
complement(122606..123979)
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AA seq
457 aa
AA seq
DB search
MHPREQTIFALSSGRPPSAIAVVRVSGAEAGTALQEIAGAIPVVRTAKRVLLRDLLGEAI
DDAIVLWFAGPASATGEDVAEFHVHGSRAVLNALFAALSSIDHVRPAEPGEFTRRAFENG
KIDLTEAEGLDDLIHADTDRQRRQALRQLQGLLGDRAREWRRELIEASALIEAGIDFADE
GDVPDDLLKPAMEKIARLRREIEETLAASAQSERLRDGMTVAIAGPPNAGKSTLLNRLAR
REAAIVSPYAGTTRDVIEVHLDLDGYPVTLIDTAGIRETDDPVEQEGVRRARDRAASADL
VLWLADDDNGVGPSQTIGEGGVPLWLVRNKIDVSGAESDGANPRQLEAKPGQGILPRHFW
ISASRGDGVDELVAALTAFSDGWFGSGETAVITRLRHRNILQDAAASLAKAEALIGQGDE
LVAEEIRIAVRLIGRLLGRVDIDDILDSLFHDFCIGK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcatccgcgagagcaaacgatcttcgccttgtcgtcgggccggccgccatcggcgatc
gcggtcgtgcgagtctcgggcgcggaggccggcaccgcacttcaagaaatcgcaggcgca
attcccgtcgtgcgcacggcgaagcgggtcttgctgcgcgacctgctcggagaagccatt
gatgatgcaattgttttgtggttcgccggacctgcgagcgcgaccggcgaagatgtcgcg
gagtttcacgttcacggcagccgcgcggtgctgaatgccttgttcgcggcgttgtcgtcg
atcgaccatgtgagacctgctgagccgggagaatttacgcggcgtgcgttcgagaacggc
aagatcgatctcaccgaggccgaagggctcgacgatctcatccatgccgacaccgaccgg
cagcgccggcaagcgctgcggcaattgcagggactgcttggtgatcgcgcgagggagtgg
cgcagggagttgatcgaggcgtcggccttgatcgaggccggaatcgatttcgccgatgaa
ggcgatgtgccggacgatctgctgaagcccgcgatggagaagatcgcgcggctccgtcgc
gagattgaagaaacccttgcggcatcggcacaaagcgaacggctgcgcgacggcatgacg
gtcgcgatcgcaggcccgccgaacgccggcaagtcgacactactcaatcgtctcgcgcgt
cgcgaggcggcgatcgtgtcgccgtatgccggaaccacgcgcgatgtcatcgaagtgcat
ctcgatctcgacggttatccggtgacgctgatcgataccgcgggcattcgcgagaccgac
gatccagtcgagcaggagggcgtgcggcgcgcgcgcgatcgggccgcgtcggcggatctg
gtgctgtggcttgcggatgatgacaatggcgtcggtccgtcgcaaacgatcggcgagggc
ggtgtgccgctctggctggtgcgcaacaaaattgatgtttcgggcgcggaaagcgatggg
gcgaacccgaggcagcttgaggcgaaaccgggtcagggtattttgccgcggcatttctgg
atttctgcgtcgcgcggcgatggcgtcgatgagttggtggcggcgctgacggcgttttcg
gacggttggttcggttcgggcgaaaccgctgtgatcacccgtttgcggcaccgcaacata
ttgcaggatgctgcagcatcgcttgcgaaggctgaggcgttgatcggacagggcgacgaa
ctggtggcggaagagatcagaattgcggttcgattgatcgggcgtctgctcgggcgcgtc
gatatcgatgatattcttgattcactctttcacgatttttgtataggtaagtaa
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