Nitrobacter hamburgensis: Nham_0179
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Entry
Nham_0179 CDS
T00348
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nha
Nitrobacter hamburgensis
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nha03016
]
Nham_0179
Enzymes [BR:
nha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Nham_0179
Transfer RNA biogenesis [BR:
nha03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Nham_0179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABE61080
UniProt:
Q1QRR7
LinkDB
All DBs
Position
complement(199614..200234)
Genome browser
AA seq
206 aa
AA seq
DB search
MTIRLHRGDLPDQDLKRYTHSAAIDTETMGLNPHRDRLCVVQMSPGDGSADVIQIAQGQR
EAPNLKQLLADPTIVKIFHFARFDLAALSNAFGVMPQPVYCTKIASRLIRTYTDRHGLKD
LVRELLNIELSKQQQSSDWGAQTLSDAQLAYAASDVLHLHALRDKLDAMLARENRTGMAQ
ACFEFLPTRAKLDLSGWGAEDIFAHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcaccgcggcgatctgccggaccaggacctcaagcgctacacgcac
tcggcggcgatcgacaccgagaccatgggtctcaatccgcatcgcgaccggctgtgcgtg
gtgcagatgtcgccgggcgacggctcggccgacgtgatccagatcgcgcagggccagcgt
gaggcgcccaacctgaaacagcttctggccgatccgaccatcgtcaagatcttccacttc
gcgcgcttcgatctcgccgcgctctccaacgcattcggcgtgatgccacagccggtctac
tgcaccaagatcgcctcgcggctgatccgcacctacaccgatcggcatggcctgaaggat
ctggtgcgcgagctgctcaacatcgaactgtcgaagcaacagcagtcgagcgactggggg
gcgcagacactgagcgatgcgcagctcgcctacgccgcttccgacgtgctgcatctgcat
gccctgcgcgacaagctcgatgccatgctggcgcgcgagaatcgcaccgggatggcgcag
gcctgtttcgagttcctgccgacacgggcaaagctcgatctttccggctggggagccgag
gacatttttgcgcacgcgtga
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