KEGG   Nitrobacter hamburgensis: Nham_0240
Entry
Nham_0240         CDS       T00348                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nha  Nitrobacter hamburgensis
Brite
KEGG Orthology (KO) [BR:nha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nha03400]
    Nham_0240
Enzymes [BR:nha01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Nham_0240
    5.6.2.6  RNA 3'-5' helicase
     Nham_0240
DNA repair and recombination proteins [BR:nha03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Nham_0240
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII MksE PSD4
Other DBs
NCBI-ProteinID: ABE61140
UniProt: Q1QRK7
LinkDB
Position
266479..269040
AA seq 853 aa
MGIADREEEQPALPDDFLRWFAARRWSPRAHQLALLQKARAGRSALLIAPTGAGKTLAGF
LPTLVELSCFPSPTGAEGSETRGLHTLYISPLKALAVDIARNLEAPIAEMTLPIKVETRT
GDTPMLRRQRQRRYPPDILLTTPEQMALLLASDDAPFLFSSLQRVVLDELHALVTSKRGD
LLSLALAQLWRLAPRMRTIGLSATVAEPESLARFLVPQPEGKIVSADIVVAGGAAAPIVE
MLDTRERLPWAGHSARHALGEIYDLIRRNRTTLVFVNTRSQAEMLFQDLWRVNDDGLAIA
LHHGSLDVAQRRKVEQAMTEGRLRGVVCTSSLDLGVDWGDVDLVINIGAPKGASRLMQRI
GRANHRLDEASRAVLVPANRFEVLECRVAIDAVNENAQDTPPLRTGALDVLAQHVLGCAC
GAPFHADQLYDEVRTAAPYAALTRADFDDVIDFVATGGYALKSYERFARIRQDKANSSES
RWRVANPKVRQSYRLNVGTIVEEAMLKVKLVRSRHGGQNRGKGSTGTIARGGRMLGEIEE
YFIEGLVVGDTFVFGGEIVRYEVLVEDQVYVSRANDDSPKVPSYMGGKFPLSTYLAERVR
NLLDDKRAWSSLPDQVRQWLSLQSHFSRVPHAREMVVETFPRAGKHYLVCYPFEGRLAHQ
TLGMLLTRRLERMRVRPLGFVANEYALAVWMLGDTSSMIGQGRLNLDALFDPDMLGDDLE
AWLAESALMKRTFRSCAIISGLIARRSTSDEKTRRQVLFSTDLVYDVLRKHQPDHLLLRA
ARTDAAAGLLDIRRLSDMLARIRGRITHKPLDRISPLAVPVMLEIGREAIYGEASDELLA
EAAEELVREATGT
NT seq 2562 nt   +upstreamnt  +downstreamnt
gtgggaatcgctgatcgcgaggaggagcagcctgcgctgcccgacgacttcctgcgctgg
ttcgcggcgcggagatggtcgccgcgcgcgcatcaactggcgttgctgcaaaaggcccgc
gccggccgctcggcgctgctgattgcgcccaccggcgccggcaagacgctggccgggttt
ctgccgacgctggtggagctttcttgctttccctctcccacgggggcagagggaagtgag
actcgaggtctccacacactctacatctcaccgttgaaggcgctggcggtcgatatcgcc
cgcaatctggaagcgccgatcgccgagatgacgttgccgatcaaggtcgagacccgcacc
ggcgatacgccgatgttacggcggcagcgccagcggcgctatccgccggacatcttgctg
acgacgcctgaacagatggcgctgctgctcgcctccgacgatgcgccgtttttgttttcg
tcgttgcagcgcgtggtgctcgacgaactccatgcgctggtgacctcaaaacgcggcgat
ctcttgtcactcgcgctggcgcagctgtggcggctggcgccgcggatgcgcacgatcgga
ttgtcggcgacggtggcggagccggagtcgctggcgcggtttctggtgccgcagccggaa
ggcaaaatcgtctcggccgacatcgttgtggccggcggtgccgccgccccgatcgttgag
atgcttgacacccgcgaacggctgccgtgggccgggcattcggcgcgccatgcgctgggc
gagatttacgatctcatcaggcgcaacaggaccacgctggtgttcgtcaacacccgcagc
caggccgagatgctgttccaggatctctggcgtgtcaacgacgacggtctcgccatcgcg
ctgcatcacggctcgctcgatgtcgcgcagcgccgcaaggtggagcaggccatgacggaa
ggccgcctgcgcggcgtggtctgtacctcgtcgctcgatctcggcgtcgactggggcgac
gtcgatctggtcatcaacatcggcgcgcccaagggcgcgtcgcggctgatgcagcggatc
ggccgcgccaatcaccgtcttgatgaggcctcgcgcgcggtgttggtgccggccaatcgg
ttcgaagtgctggagtgccgcgtcgccatcgatgcggtgaacgagaacgcgcaggatacg
ccgccattgcgcaccggcgcgctcgacgtgctggcccagcacgtgctcggctgcgcctgc
ggcgcgccgtttcatgccgatcaactctacgatgaggtgcggaccgccgcgccctatgcg
gcgctgacgcgcgccgatttcgatgacgtgatcgatttcgtcgcaaccggcggctacgcg
ctgaaatcctacgagcgtttcgcgcgtatcaggcaggataaggcaaattcttccgaatcg
cgctggcgcgtcgccaatccaaaggtacggcagagctatcgtctgaacgtcggcaccatc
gtcgaggaggcgatgctgaaggtgaagctggtgcgctcgcggcacggcggccaaaaccgg
ggtaaaggttcgaccggcactattgcgcgcggcggccgcatgctcggggagatcgaggaa
tacttcatcgaaggtctcgttgtcggcgatactttcgtattcggcggcgagatcgtgcgt
tacgaggtgctggtggaagatcaggtctatgtctcccgcgccaatgacgacagccccaag
gtgccgtcctacatgggcggcaagttcccgctctcgacctatctggccgaacgggtccgc
aacctgctcgacgacaagcgcgcatggagcagcctgccggatcaggtacggcaatggctg
tcgctgcagtcgcatttttcgcgcgtgccgcacgcgcgcgagatggtcgtcgagaccttt
ccgcgcgccggcaagcactatctcgtctgctatccgttcgaggggcggctcgcgcaccag
acgctcggaatgctgctgacgcggcggctggagcggatgcgcgtgcggccgctcggcttt
gtcgccaacgaatatgcgctggcggtctggatgctcggcgatacttcgtcgatgatcggg
cagggtcggttgaatctggatgcgctgttcgatccggacatgctcggcgacgaccttgag
gcatggcttgcggaatcggcgctgatgaagcgcacgttccgcagttgcgcgatcatctcc
gggctgatcgcgcggcgctcgacttctgatgagaagacccggcggcaggttttgttctcc
accgatctcgtctacgacgtgctgcgcaagcatcagccggatcatctgctgttgcgcgcg
gcgcgtaccgatgcagcggccgggttgctggatatccgccgcttaagcgatatgctggcg
cggatcaggggccggatcacccacaagccgctcgaccggatttcgccgctggcggtgccg
gtgatgctggagatcggccgcgaggcgatctatggcgaggcgtcggacgaactgctggcc
gaagctgcggaggaactggtgcgcgaggcgacgggaacatga

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