Nitrobacter hamburgensis: Nham_0330
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Entry
Nham_0330 CDS
T00348
Name
(GenBank) Exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03030
DNA replication
nha03430
Mismatch repair
nha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nham_0330
03430 Mismatch repair
Nham_0330
03440 Homologous recombination
Nham_0330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nha03032
]
Nham_0330
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_0330
Enzymes [BR:
nha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nham_0330
DNA replication proteins [BR:
nha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Nham_0330
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Nham_0330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
RNase_H_2
Chromo_2
Motif
Other DBs
NCBI-ProteinID:
ABE61226
UniProt:
Q1QRC1
LinkDB
All DBs
Position
360182..361186
Genome browser
AA seq
334 aa
AA seq
DB search
MSNSDFIVLDVETANADYASICQIGLVEVVAGEVVSQEAILVNPDDYFDGFNTSIHGITA
DHVCGAPLFHEVHAALSQRLSGSIIVHHGPFDRVSISRACERCGIESFDVQWLDNQRVVR
RVWEQFSKSGYALKSLAAFFGIEFQHHDALQDAIATNEIFRRALNESGTTAADWLSRIKQ
SLPTTAKTISGDGNPDGPFSGETIVFTGELNIPRSEAADIAKRLGFRVEDGVTKRTTVLC
AGVQDRTKTGGYDKSSKHRKAESLAGLGQDIRILSEGDFWAIVPKPMRPNVKTERPPSER
SNHRGQLIVSLSLEDLFTDEELQRMLTGMPLSDA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattcagattttattgtgttggacgtggaaacggccaatgccgactatgcctcg
atatgccagataggcttggttgaggtggtggccggcgaggtggtttctcaggaagcgata
ctggtgaacccggacgactatttcgatgggttcaatacctctattcatggaatcaccgca
gaccacgtttgtggcgcgcctctattccacgaagtccacgccgcactgtctcaacgcctt
agcggctcaattattgtgcaccacgggccgtttgatcgggtgtctatatcgcgggcatgc
gagcgctgcgggattgaaagcttcgacgtgcagtggctcgataatcagcgagtagtgcgc
agagtgtgggagcaattcagcaagagcgggtatgccctaaaaagcctggccgcgtttttc
ggaattgaattccaacaccatgatgctttgcaagatgccatcgccacaaatgagatattc
cggcgagccctaaatgaatccggaacgactgctgctgattggctatcccgaataaagcaa
tcgctgccgactactgcgaagacgatatctggcgatggaaatcctgatggtccgttttct
ggcgaaaccatcgttttcacaggtgaactgaatatcccacgttcagaggcggccgatata
gctaagaggttaggattccgagtcgaggatggcgtcactaaacgcacgactgttttatgt
gccggggttcaggataggaccaaaaccggcggatacgacaaatcttccaaacaccgcaag
gccgagtctctggcgggcttagggcaggacattcgtattctgtcagagggcgatttttgg
gcaatcgtaccgaaaccgatgcgaccgaacgttaaaaccgaacggccaccatctgagcgt
tccaatcatcgcggtcagttaatcgtttcgctatcactggaagacctattcacagatgag
gaattgcaaagaatgttgaccgggatgcctttgagtgacgcctaa
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