Nitrobacter hamburgensis: Nham_0423
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Entry
Nham_0423 CDS
T00348
Name
(GenBank) Carbohydrate-selective porin OprB
KO
K16080
high affinity Mn2+ porin
Organism
nha
Nitrobacter hamburgensis
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nha02000
]
Nham_0423
Transporters [BR:
nha02000
]
Other transporters
Pores ion channels [TC:
1
]
Nham_0423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
OMP_b-brl
OmpA_membrane
Porin_2
Motif
Other DBs
NCBI-ProteinID:
ABE61314
UniProt:
Q1QR33
LinkDB
All DBs
Position
complement(465989..468067)
Genome browser
AA seq
692 aa
AA seq
DB search
MRANGAIDDQYGNLPVQADGPMSAIRPFRLRRGRHVVLAGVALSALALGGSAVAADVGAS
LLPTKAMPRPVIDWTGLYFGAHAGFGGGRSTATLVDPASTTGRNDYGGIISGVQAGYNIQ
LPSGLLLGLEADISFPNYIESNSDVSKLATARSAVTQQWDFIGSARGRIGYATGPWLTYA
SGGLAFAGERYLNDLPSGDQEKALDMRLGWAAGAGLEYAFTPSWSARLEYLYYRFDKTNV
QFPSAAQYAATMDMHSIRVGLNRKLGGSAGIADLSLKSLTDPESDRWEIHGQTTYLGQGY
PAFRAPYSGANSLTPGAQYQATWSNSLFLNARLWDGGEVYYNPELLQGFGLSDTVGVAGF
PSGEAQKSNFPYPHYNTSRLFVRQTFGFGGEQEELASGPAQLAGKADISRLTIQAGKFAV
TDVFDGNAYAKDTRSDFMNWSLWAPGAFDYSADRLGLSYGVTAELNQKQWALRGGYFLMD
AESNANSFDTRLFRRGEYVLELETRYSLLGQPGKLRTIGWLNSAYMGSYRDTLNNPAFNL
DIAQTRTGRIKYGYVVNIEQAVTDDIGLFGRWSWNDGKTEIMAFTDIDASLALGTSIKGT
RWSRPGDVIGIGGAINALSRDHRDFIAAGGLGVLVGDGQLNYRHERVLEAYYAYALNKQF
TLTADYQFIANPAYNADRGPVHVFSGRLHGEF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttgcgagcgaacggtgcgatagatgaccaatacgggaacttgccagtccaagcggacggt
ccgatgagtgccatccggccattccggctgcggcgcggaaggcacgttgtgctggccggc
gtggccttgagcgcgcttgcgctgggcggctcggctgtcgccgccgatgtcggcgcatcc
ctcctgccgaccaaagccatgccccgcccggtgatcgactggaccggcctctattttggc
gcccatgccgggttcggcggcggccgatccacagcaacgctcgtcgatcctgcgtcgacc
accggccgcaacgattacggcggcattatcagtggcgttcaggccggctacaacatccag
cttccctcgggactgctgctcggcctcgaagccgacatctcgtttccgaactacatcgag
tccaattcggacgtctcaaagctcgcgaccgcacgctccgccgtcacgcagcagtgggat
ttcatcggatcggcgcgcggccggatcggctacgccacgggtccatggctgacctatgcc
agcggcggtctcgcctttgccggcgagcgctacctgaacgatctgccgtcgggcgatcag
gagaaggcgctggacatgcgccttggctgggcagccggcgcggggcttgaatacgccttc
acgccaagttggagcgcgcggctggaatatctttactaccggttcgacaagacgaacgtt
cagtttccatcggccgcgcaatacgccgcgacgatggacatgcattcgattcgcgtcggc
ctcaaccgcaagctcggcgggtcggccggcatagccgatctctcgctgaagtccctgacc
gatcctgaatccgatcgctgggagattcatggccagacaacctatctcggccagggctac
ccggcgttccgcgcgccctacagcggcgccaacagcctgacgccgggcgcgcagtatcag
gcaacctggagcaacagcctgttcttgaacgcgcggctctgggacggcggcgaagtctac
tacaaccccgaactgcttcagggcttcggcctcagcgacaccgtcggagtcgcgggcttc
ccaagcggcgaggcgcaaaagtccaacttcccctatccgcactacaacacctcgcggctg
ttcgtgcgccagaccttcggcttcggcggcgagcaggaagaactggcgagcgggccggcg
caactcgcgggcaaagccgacatctcgcggctgacgatccaggccggcaagttcgctgtc
accgacgtgttcgacggcaacgcctatgccaaggatacccgctcggacttcatgaactgg
tcgctgtgggcgcccggcgccttcgactattccgccgacaggctgggactgagttacggc
gtcaccgccgagctcaaccagaaacaatgggcgctgcgtggcggctattttctgatggac
gcggaatcgaacgcgaacagcttcgacacccgcctgttccggcgcggcgagtatgtgctg
gaactggaaacgcgctattcgctgctgggccagcccggcaagctccgcaccatcggctgg
ctcaacagcgcctatatgggcagttatcgcgacacgctgaacaatcccgctttcaatctc
gacatcgcgcagacccgcaccggccgcatcaagtacggttacgtcgtcaatatcgagcag
gcggtcaccgacgacatcggactgttcggccgctggagctggaacgacggcaagaccgag
atcatggcgttcaccgatatcgatgccagcctcgcgctcgggacctcgatcaagggcacg
cgctggagccggccgggcgacgtgatcggcatcggcggcgcgatcaacgcgctgtcacgg
gatcatcgcgacttcatcgccgccggcggcctcggcgttctcgtcggcgatggccagctc
aactaccgccacgagcgcgtgctggaagcttactatgcctatgcgctcaacaagcagttc
acgctgactgcggactatcagttcattgccaaccccgcctacaacgccgaccgcggcccg
gtgcacgtgttttccggacggctgcacggggagttttga
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