Nitrobacter hamburgensis: Nham_0453
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Entry
Nham_0453 CDS
T00348
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03030
DNA replication
nha03410
Base excision repair
nha03420
Nucleotide excision repair
nha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Nham_0453
03410 Base excision repair
Nham_0453
03420 Nucleotide excision repair
Nham_0453
03440 Homologous recombination
Nham_0453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nha03032
]
Nham_0453
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_0453
Enzymes [BR:
nha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Nham_0453
DNA replication proteins [BR:
nha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Nham_0453
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Nham_0453
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nham_0453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABE61343
UniProt:
Q1QR04
LinkDB
All DBs
Position
complement(499092..502136)
Genome browser
AA seq
1014 aa
AA seq
DB search
MPKKPTPATKPVPTPAAAEAVTVKSAAATKSDMQGKHVFLVDGSSYIFRAYHALPPLNRK
SDGLQVNAVLGFCNMLWKLLRDMPKDDKPTHLAIIFDKSEVTFRNKLYPAYKAHRPPAPD
DLIPQFALIREAVKAFDLPCIEQGGFEADDLIATYVRQACERGATATIVSSDKDLMQLVT
DCVTMFDTMKDRRLGIAEVIEKFGVPPEKVVEVQALAGDSVDNVPGVPGIGVKTAAQLIT
EYGDLETLLAQASEIKQPKRREALIENAEKARISRQLVLLDDHVALDVPLDDLAVQEPDA
RKLIAFLKAMEFTTLTKRVADYSEVNAAEIEPDRKNASGASSTAAKASAEAVTSDLFGSD
GVAKATSAGRTRATSDTAIKTPQALAAARLEAVRKLPVDRTQYETIRTLDRLQHWIARIA
NHGSFVVEALAPTIDPMQAELSGIALALAPNAACYVPLNHKQAGDSAGLFAAGLAPDQIA
IRDALDLLKPLLESGGHLKVGFNVKFTAVLLAQHGIVMQNNDDVELISYALDAGRGAHDL
EALAQRWLDHTALNYGELIGSGRNKLAFDQVTIDRATTYAAEYAALTLRLWQVLKPRLVA
ERMNSVYETLERPMIATLARMERRGITIDRQVLSRLSGEFAQTAARLEAEIQKLAGEPIN
VGSPKQIGEIMFGKMGLPGGSKTKTGAWSTSAQILDDLAEQGHDFPRKILDWRQVSKLKS
TYTDALPEYVNPQTSRVHTTYALAATTTGRLSSNEPNLQNIPVRNEEGRKIRRAFIATPG
HKLVSADYSQIELRLLAEIADIPVLKQAFRDGLDIHAMTASEMFGVPVTGMPGEIRRRAK
AINFGIIYGISAFGLANQLGIPREEAGTYIKKYFERFPGIRAYMDATRDFCREHGYVETL
FGRKCHYPDIKSPNPSHRAFNERAAINARLQGTAADIIRRAMVRMDDALAAKKLSARMLL
QVHDELIFEVPDDEVAATLPVVQHVMQDAPFPAMLLSVPLQVDARAADNWDEAH
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaagcccacccctgccaccaagcccgtacccactcccgccgccgcggaagct
gtgaccgtgaagtccgcggccgcgaccaagtcagacatgcagggcaagcacgtctttctg
gtcgacggctcctcctacatcttccgcgcctatcacgcgctgccgccgctgaaccgcaaa
tccgacggcttgcaggtcaacgcggtgctcggcttctgcaacatgctgtggaagctgttg
cgcgacatgccgaaggacgacaagccgacccaccttgcgatcatcttcgacaagtccgag
gtgacgttccgcaacaagctctatcccgcctacaaggcgcatcggccgcccgcgcccgac
gacctgatcccgcaattcgcgctgattcgcgaggccgtgaaggcgttcgatctgccctgc
atcgagcagggcgggttcgaggccgacgacctgatcgcgacctatgtgcggcaggcgtgc
gaacgcggcgcaaccgcgaccatcgtctcctcggataaggatctgatgcagctcgtcacc
gattgcgtcaccatgttcgacaccatgaaggaccgccgcctcggcatcgccgaggtgatc
gagaaattcggcgtaccgccggaaaaagtcgtcgaggtgcaggcactggccggcgacagc
gtcgacaacgtgccgggcgtgccgggcatcggcgtcaagaccgcggcgcagctcatcacc
gaatacggcgacctcgaaacgctgctggcgcaggcctccgagatcaagcagccgaagcga
cgcgaggcgctgatcgaaaacgccgagaaggcgcgcatttcgcggcaactggtgctgctc
gacgaccacgtcgcgctcgacgtgccgctggacgacctcgccgtgcaggagcccgatgca
cgcaagctgatcgctttcttgaaggcgatggaattcaccacgctgaccaagcgcgtcgcc
gactattccgaggtcaacgcggccgagatcgagccagacaggaaaaacgccagcggcgcg
tcttccacagcagccaaggcatccgcagaggccgtcaccagcgacttgttcggcagcgac
ggtgtcgcgaaggcgacatcggccggcaggacaagggcgacgagcgacacggcgatcaag
acgccgcaggccctcgccgcggcgcgcctcgaagcggttcgaaaactgccggtcgatcgc
acacaatacgaaaccatccgcacgctcgaccggctgcagcactggatcgcccgcatcgcg
aaccatggcagtttcgtcgtcgaagcgctggcgccgacaatagaccctatgcaggccgaa
ttgtccggcatcgcgctggcgctcgcgccgaacgcggcgtgctacgtcccgctcaaccac
aagcaggccggcgacagcgccggtctgttcgccgccggccttgcgcccgatcagatcgcg
atccgtgacgcgctcgacctgctaaagccgctcctcgaatccggcggccacctgaaggtc
ggcttcaacgtcaagttcaccgccgtgctgctcgcgcaacacggcatcgtcatgcagaac
aacgacgacgtcgagctgatttcctacgcgctcgatgccggacgcggcgcccacgatctc
gaagcgctggcgcagcgctggctcgatcacacggccttgaactatggcgaactgatcggc
agcggcaggaacaagcttgccttcgatcaggtgacgatcgatcgcgccacgacttacgcg
gcggagtacgccgccctgaccttgcggctgtggcaggtgttgaagccgcggctggtcgcc
gagcgtatgaattctgtctacgagacgctggaacggccgatgattgcgacgctggcgcgg
atggagcggcgcggcatcaccatcgaccggcaggtgctgtcgcgcctgtctggcgaattc
gcgcagaccgcggcgcgactggaagccgaaatccagaagcttgccggcgagccgatcaat
gtcggcagcccgaagcagatcggcgagatcatgttcggcaagatgggcttgccgggcggc
agcaagaccaagaccggcgcatggtccacctcggcgcaaatcctggacgacctcgccgag
cagggccacgacttcccgcgcaagattctcgactggcggcaggtttcaaaactgaaatcg
acctataccgacgcgctgccggaatacgtcaatccgcagaccagccgcgtgcacaccacc
tatgcgctcgccgccaccaccaccgggcggctgtcgtcgaacgagcccaacctgcagaac
attccggtgcgcaatgaggaagggcgaaaaatccgccgcgccttcatcgccacgcccggc
cacaagctggtctcggccgactactcccagatcgaactgcggctgctcgccgagatcgcc
gacatcccggtgttgaaacaagcgttccgcgacgggctcgacattcacgccatgacggcg
tcggaaatgttcggcgtgccggtgacgggcatgccgggcgaaatccgccgccgcgccaag
gccatcaatttcggcatcatctacggtatctcggcgttcggcctcgccaaccagctcggc
atcccgcgcgaggaagccggcacctacatcaagaaatatttcgagcgctttcccggcatc
cgcgcctacatggacgcgacccgcgacttctgccgcgagcacggttatgtcgaaacgctg
ttcggacgcaaatgtcactatccggacatcaagtcgccgaacccgtcgcaccgcgccttt
aacgagcgcgccgcgatcaatgcgcgattgcagggcaccgccgccgacatcatccgccgc
gccatggtgcggatggacgatgcgctggcggcgaagaagctgtccgcgcgaatgctgctg
caggtccacgacgaactgatttttgaagtgccagacgacgaggtggccgcgacactgccg
gtcgtccagcatgtgatgcaggacgcgccgttcccggcgatgctgctgtcggtgccgttg
caggtcgacgcccgcgccgccgacaactgggacgaggcgcattaa
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