Nitrobacter hamburgensis: Nham_0535
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Entry
Nham_0535 CDS
T00348
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Nham_0535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_0535
Enzymes [BR:
nha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Nham_0535
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Nham_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
ABE61425
UniProt:
Q1QQS2
LinkDB
All DBs
Position
complement(590563..592779)
Genome browser
AA seq
738 aa
AA seq
DB search
MDHFSRNGTSSTPSSTTRVVDVLVPVAIDQAYSYRVPRGMEVAPGDLVTVPLGPREVIAV
VWAENPAPDPRLHNRLKDIGEKLDLPPLKDELRTLVDWVANYTLSARGMVMRMSLRMGEQ
LGPERVRPGVRLTGAPPQRMTPARQRLIAVLSDGLLHGKSDAAKEAGVSAGVVDGLVDER
TLTVEPMPRPPPPPPPDPDFAVPDFSRSQRTAVDAMRALASNGTFHVALLDGVTGSGKTE
VYFEAVAETIRRGKQALILMPEIVLTGQFRDRFAARFGERPLEWHSELTPRTRARNWAAI
AAGEGQVVVGARSALFLPYADLGLIIVDEEHDQAYKQDEGTHYHARDMAVVRAHIAKIPI
VLASATPSVESEVNARKGRYQRVALTSRFGGQHMPQIEVIDLRREGPPRGRFISPRLAGE
VRAAIERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSM
PRPHQCPHCAAEETLVAVGPGVERLQEEAAALFPDARTLVLSSDLVTSIETMRSELNDIA
EGRVDIIIGTQLVAKGHHFPRLNLVGVIDADLGLGNGDPRAAERTFQLLNQVIGRTGREQ
GHGVGYLQTHQPEHPVMRALVASDREAFYASEIEARERSGYPPFGRLASLIISAGDRPTA
ESFARRLAAIAPIDERIQVLGPAEAPLAVIKGRYRFRLLVKSARGVDLSGYLREWLAAGP
KTKGNLKLEIDVDPQSFL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttttcgcgcaacggcacgtcttcaacaccgtcatcgacgacacgcgtcgta
gatgtgctggttcccgttgcgatcgatcaggcctattcctatcgcgtgccgcgcggcatg
gaggttgcgcccggcgacctcgtgacagtaccgctcggaccccgcgaggtgatcgccgtg
gtctgggccgagaacccggcgcccgatccgcgcctgcacaaccgcttgaaagacatcggc
gaaaagctcgacctgccgccgcttaaggatgaactgcgtacgctggtcgactgggtcgcc
aactacacgctgtcggcgcgcggcatggtgatgcgcatgagcctgcgaatgggcgagcaa
ctcggaccggagcgggtgcggccgggtgtgcggctgaccggcgcgccgccgcagcgcatg
accccggcgcgacagcggctgatcgcggtgttgtccgatggtctgctgcacggaaaatcc
gatgcggcgaaagaagccggcgtcagtgccggcgtggtcgacggcctcgtcgacgagagg
acgttgacggtcgagccgatgccgcgtccaccgccgccaccgccgcccgatccggatttc
gccgtgccggatttttcccgatcacagcggaccgccgtggacgccatgcgcgcgctggcg
tcgaacggcacgttccacgtcgcgttgctcgacggcgtcaccggctcgggcaagaccgag
gtctattttgaggcggtcgcagaaaccatccgccgcggcaagcaggcgctgatcctgatg
ccggagatcgtgctgaccgggcagttccgcgaccgcttcgccgcccgcttcggcgagcgg
ccgctggagtggcattccgaactgacgccgcgcacccgcgcgcgcaactgggccgcgatc
gcggcaggcgaggggcaggtcgtggtcggcgcacgctcggcgctgttccttccttacgcc
gatctcggactgatcattgtcgatgaggagcacgaccaggcttacaaacaggacgagggc
acacactatcacgcccgcgacatggccgtggtgcgcgcgcatatcgcgaaaatcccgatc
gtgctggcgtcggcgaccccatcggtggagagcgaggtcaatgcgcgcaagggacgctac
cagcgcgtcgcgctgacgtcccggttcggcggtcagcacatgccgcagatcgaggtgatc
gatctgcgccgcgagggaccgccgcgcggccgcttcatttctccgcgtctcgccggggaa
gtccgcgccgctatcgaacggcgggagcaggcgctgctgtttctcaaccgtcgcggctac
gcgccgctgaccttgtgccgggcctgcgggcatcgcttcgcctgcaccatctgcgatgcg
tggctggtcgatcaccgcttccgtcagcggctggtatgccaccactgcggcttctcgatg
ccgcgcccgcatcaatgtccgcattgcgcggcggaagaaacgctggtggcggtcggcccc
ggcgtcgagcgcttgcaggaagaagctgccgcgctttttcccgatgcccgcaccctcgtg
ctgtcgagcgatctggtgacctcgatcgaaaccatgcgctcggaactgaacgatatcgcg
gagggccgcgtcgatatcatcatcggcacgcaactggtggccaagggccatcactttccg
cgtctcaaccttgtcggcgtcatcgacgccgacctcggccttggcaacggcgatccccgc
gctgcggagcggaccttccaactgctcaaccaggtgatcggccgcaccggccgcgagcag
ggccacggcgtcggctatctgcaaacccatcagcccgaacatccggtgatgagggcactg
gtcgcaagcgaccgcgaggcgttctacgccagcgagatcgaggcgcgggagcgctcgggc
tatccgccgttcggccggctggcgagcctgattatttccgcaggcgaccgcccgaccgcg
gagagttttgcccgccgcttggcggcgatcgcgccgatcgacgagcgcattcaggtgctc
gggccggccgaggcaccgctcgctgtgatcaagggccgctatcgtttccggttgctggtg
aagtcggcgcgcggcgtcgatctgtccggctatttgcgcgaatggctcgctgcaggaccg
aagaccaaaggcaatctcaagctggagatcgacgtcgatccccagagctttctctga
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