Nitrobacter hamburgensis: Nham_1334
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Entry
Nham_1334 CDS
T00348
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha00350
Tyrosine metabolism
nha00360
Phenylalanine metabolism
nha00380
Tryptophan metabolism
nha01100
Metabolic pathways
nha01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Nham_1334
00360 Phenylalanine metabolism
Nham_1334
00380 Tryptophan metabolism
Nham_1334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nha04147
]
Nham_1334
Enzymes [BR:
nha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
Nham_1334
4.1.1.105 L-tryptophan decarboxylase
Nham_1334
Exosome [BR:
nha04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Nham_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
PDXDC1-like_cen2
Motif
Other DBs
NCBI-ProteinID:
ABE62158
UniProt:
Q1QNN9
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All DBs
Position
1511429..1512922
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AA seq
497 aa
AA seq
DB search
MTFAPREPRADADETLDPDDWDALRAQGHRMLDDMVDYIAGIRTRPVWQPIPAETRARFR
AGLPRASADLDGIYREFADHIAPYTAGNVHPGFMGWVNGGGTAVGMLAEMLAAGLNANLG
GRDHVPIEVERQIALWVRQMFGFPDTASGIFVTGTSMANLMGVLVARAARLGPSVRERGL
SDRGAGLTAYTSAATHGCIAQAMDLAGFGTDALRRIPVDRCHRIGVDALRAQVAVDRAAG
LEPFLVIGSAGTVDIGAIDDLAALHALCRDENLWLHIDGAYGALGILSPEIAPRLAGIES
ADSIAFDFHKWGQVPYDAGFLLVRDGEQHRRTFAAPAAYLRRETRGLAAGSPWPCDYGPD
MSRGFRALKTWFTLKAYGTDKLGAMIARTCALARCLEAKVAAEPKLELLAPVQLNIVCFR
YRSDDTDRVNAGIVASLHESGIAAPSTTTLDGRLAIRAAIVNHRTGVRDIEALVSAVLEF
GARESEVRQFEAREAGR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcaccgcgcgagccgcgggctgacgccgacgagacactcgatccggacgac
tgggacgcactgcgcgcgcaggggcaccggatgctcgacgatatggtcgattatatcgcc
ggcattcgcacgcgcccggtgtggcagccaattccagcggaaacgcgtgcacgcttccgc
gccgggctgccgcgggcgagcgccgatctcgacgggatctatcgggagtttgccgaccac
atcgcgccttacaccgccggcaacgttcatcccggcttcatggggtgggtcaacgggggc
ggcaccgccgtcggaatgctggccgagatgctggcggccgggctgaacgccaatctcggc
ggccgcgatcacgttccgatcgaggtcgagcgccagatcgctctgtgggtgcggcagatg
ttcggctttcccgataccgcgagcggcatcttcgtcacggggacatcgatggcgaacctg
atgggggtgctggtggcgcgcgcggcgcggctcggcccgtcggtgcgcgagcggggtctg
tcggatcgcggcgccggtctcaccgcctatacgtcggcggcgacgcacggttgcatcgcg
caggccatggacctcgccggcttcggcaccgacgcgctgcggcggattccggtcgatcgc
tgccatcgcatcggtgtcgatgcgttgcgtgcgcaggtcgcagtcgatcgcgctgccggt
cttgaaccgtttctggtgatcggctcggccgggaccgtcgacatcggggcgatcgacgat
ctggcggcgttgcatgcgctgtgccgtgatgagaacctgtggctgcacatcgacggtgcg
tacggcgcgctcggtatcctgtcgccggagatcgcaccgcgccttgccggcatcgagagc
gccgactccattgctttcgatttccacaaatggggacaggtgccctatgatgcgggtttc
cttctcgtccgcgacggcgagcagcaccggcggacgtttgcggcgccggcggcgtatctg
cgtcgggaaacgcgcgggctcgcggcgggctcgccgtggccgtgcgactacgggccggat
atgtcgcgcggattccgcgcgctgaagacgtggttcacgttgaaagcctacggcaccgac
aagctcggcgcgatgatcgcccggacctgcgcgctcgcgcgctgcctcgaagcgaaggtc
gccgccgagccgaagctcgaactgctggcgccggtgcaactcaacatcgtgtgcttccgc
tatcggtccgacgataccgacagggtcaatgccgggatcgtcgcatcgctgcacgagtcg
ggtatagcggcgccgtccacgaccacgctcgacggccggctggcgatccgcgcggcgatc
gtcaatcatcgcaccggggtgcgcgacatcgaagcgctggtgtcggcggtgctggaattc
ggcgcgcgtgaatccgaagttcgccaatttgaagcccgcgaagccggacgctga
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