Nitrobacter hamburgensis: Nham_1569
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Entry
Nham_1569 CDS
T00348
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Nham_1569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nha03021
]
Nham_1569
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_1569
Enzymes [BR:
nha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Nham_1569
Transcription machinery [BR:
nha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Nham_1569
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Nham_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
DUF4249
Motif
Other DBs
NCBI-ProteinID:
ABE62391
UniProt:
Q1QN06
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All DBs
Position
1772356..1773375
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AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLHVVPGSDPSRFATLIAEPLERGFGQTLGNALRRILLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGTVTAGDIQ
TVGDIVVLNPDLPICTLDDGAEIRMEFTVASGKGYVAAERNRPEDAPIGLIPVDSLYSPV
RKVSYKVENTREGQILDYDKLTMMIETNGGVTPEDAVAFAARILQDQLNVFVNFEEPRKE
VATEIIPDLAFNPGFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaagaacttattcggccgaacaagctgcacgtcgttccc
ggcagtgatccctcgcgcttcgcgaccctgatcgccgagccgctcgagcgcggtttcggc
cagacgctcggtaatgcgctgcgccgcatcctgctgtcgtcgctacagggtgctgcggtg
cagtcggtgcacatcgacggcgtgctacacgagttctcctcgatcgcgggcgttcgcgag
gacgtcaccgacatcgtgctgaacatcaaggacatctcgatcaagatgcagggcgaaggc
ccgaagcgcatggtcgtgaagaagcagggccccggcaccgttaccgcaggcgacatccag
acggtcggcgatatcgtggtgctcaatcccgaccttccgatctgtaccctcgacgacggc
gccgagattcgcatggagttcaccgttgcctccggcaagggctacgtcgccgccgagcgc
aaccggcccgaggacgcgccgatcggactgatccctgtcgacagcctgtattcgcccgtg
cgtaaggtatcctacaaggtcgagaacacccgcgagggccagattctcgactacgacaag
ctgacgatgatgatcgagaccaacggcggcgtgacgccggaggacgccgtggccttcgcc
gcgcgcatcctgcaggatcagctcaacgtcttcgtcaacttcgaggagccgcgcaaggaa
gtcgccaccgagatcatcccggatctggcgttcaacccgggattcctcaagaaagtggac
gaactggaactgtcggtgcgctccgcaaactgcctgaagaacgacaacatcgtctacatc
ggcgacctggtgcagaaatcggaagcggagatgctgcgcacgccgaacttcggccgcaag
tcgctaaacgaaatcaaggaagtgctggcccagatgggtctgcatctcggcatggaagtg
cccggctggccgccggagaatatcgacgaactggccaagcgcttcgaggatcattactga
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