Nitrobacter hamburgensis: Nham_3027
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Entry
Nham_3027 CDS
T00348
Name
(GenBank) hypothetical protein
Organism
nha
Nitrobacter hamburgensis
Pathway
nha02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Nham_3027
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Beta_helix
Big_7
Big_3_3
HemolysinCabind
Big_9
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ABE63773
UniProt:
Q1QJ24
LinkDB
All DBs
Position
complement(3331734..3335570)
Genome browser
AA seq
1278 aa
AA seq
DB search
MASTTPSNGWPDATSTGVPAGVTLTASGDVIIDKPGTVISGLNIRGSVYINADNVTVENC
QITSSGWAVVKVKSGVTGAVVQDCTIDGTGHGPDGTGNEGIMGQGTFLRNNISNVENGIT
ITGNNSVIMDNYIHDLNAGGSPHYDGIQIDGGVSNIQISHNSIINQRGWTSAIMIDNYFG
AASNISVDNNLLVGGAYTVYSDGSFSSSPITGVSFTNNHIGGGAYGPAMIRGSNPVYTGN
IDDGATLAQGLQTTGQPSGSQLTTPELPHAPDAPTIASFSNDSGVAGDGITNDNTLALKG
TAAANSTVKVFDGATQIGTATASGSGAWSFTTAALADGKHSLTAKAADASGQTSAASSAL
GVTIDTKAPDAPVEVDHSVVNGDQLLLKGTAEANSTIKVFDGTTVVGTAKADASGNWSVQ
TSSLSSGTHVLTATATDAAGNTSPQSLPFDPVIEKPAPTPPLSAPKILSVSEDTGVAGDL
VTSDNTLTLEGTAAANSTVKVFDGTTQIGTATANDKGAWSFTTATLTDGKHNLTAKAMDA
SGQTSAASSALGVTIDTHPPAAPKIGSISSDGKVVSDGIVHSDHVTFTGTGEANSTVKIY
DGTTQIGTATANNKGAWTYTADTLKDGSHQFSAKAIDLAGNISGASKAQGLTIDSHAAGS
GGTTGPADSHGWPDATTTGVPAGVTLTASGDVIIDKPGTVISGFDIRGGVYINANNVTVE
NCKITSSGWAAVKVKSGVTGAVVQDCTIDGTGHGPDGTGNEGIMGQGTFLRNNISNVENG
ITITGSNSVIKDNYIHHLKAGGSPHYDGIQIDGGVSNIQISHNSIINQNGGTSAIMIDNY
FGAVSNVAVNNNLLVGGAYTVYADGSQGSKPITGVSFTDNHIGGGQYGPALIRGNKPVYT
GNVDDGATLAQGLHTTGQPSGSLQTSTTDAPHALAIASVSNDGGVVGDGTHSLTAKAVDV
SGQASAASSVPGVTIDTKAPDAPKIGSISSDGKVVSDGVAHSGHVSLAGTAEAHSTVKVY
DGTTQIGTATANDKGAWTYDAAALKDGSHQFSAKAMDLTGNISGASKAQGLTVDTHTDGS
SGGSSGHHGGGLSADFTSMFHNGNDTVTFKGTADPYSQISIYDNGKGDALGVAKAGADGK
WSFNTKSAVSDTVHNFTAEVTNKAGHTGSSSGSAILGTGGNDVLKSTSGNDLFHGHGGHD
TFVFAPNFGADVITDFRASGRSHDVVQFSKSVFDNFADVLSHAAQSGHDVAIDSGGGNTL
TLKDTKLAALDKTDFHFV
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
ttggcttctactaccccctcaaacggatggcctgatgcaaccagtacgggcgttcctgct
ggcgtgacactgacggcttcgggtgacgtgattatcgacaaacccggcacggtgatctcg
ggactgaatatccgcggaagtgtctatatcaacgcggacaacgtgacggtggagaattgt
cagatcacgtccagtggctgggcagtcgttaaagtgaagtccggcgtgacgggcgccgtc
gtgcaggattgcacgatcgacggcaccggtcatggccccgatggcaccggcaacgaaggc
attatggggcagggcacgttcctgcggaataatatctccaatgtcgaaaacggcatcacg
attaccggcaataactcggtgatcatggacaattatatccacgatctcaatgccggcggc
tcgccgcattatgacggcatccagatcgacggtggggtctccaatatccagatctcccac
aactcgatcatcaatcagcgcggctggacgtccgcgatcatgatcgacaattacttcgga
gcggcctccaatatctccgttgataataatctgctcgtcggcggtgcttatacggtctat
tccgacggcagcttcagcagcagccccattaccggcgtttccttcaccaataatcatatt
ggcggcggtgcatacggaccggcgatgatccggggaagcaacccggtctacaccggcaat
atcgatgacggcgccacgctggctcagggactccaaacgaccggccagccgagtgggtcc
cagctgacgacaccggaactgccgcatgcaccggatgcgccgaccatcgcgtcgttctcc
aatgacagtggggtcgccggtgatggcatcaccaatgacaacacgctggccctcaagggc
actgcggctgcgaacagcacggtgaaggtgttcgacggcgcgacccagatcggcaccgcg
accgccagcggcagcggcgcctggagcttcaccacggctgcgctggccgatggcaagcat
agcctgacggcgaaagccgcggatgcgtcggggcagacaagcgcggcgtcttcagcgctc
ggcgtgaccatcgataccaaggcgccggacgcgccggtcgaggtcgatcactcggtcgtc
aacggggatcagttgctgctcaagggcacagccgaagccaacagcacgatcaaggtgttc
gacggaaccaccgttgtcggcactgcgaaggcagacgccagcgggaactggagcgtacag
acctcgtcgctgtccagcgggactcatgtcctgactgcaacggcaaccgacgcggccggg
aacaccagcccgcagtcgctgccgttcgatccagtgatcgaaaagccagcccccacgccg
ccactgtcggctcccaagatcttgtcggtttcagaggataccggggtggctggcgatctc
gtcaccagtgacaacacgttgaccctggaggggacagcggccgccaacagtaccgtgaag
gtgttcgacggcacgacccaaatcgggactgcaaccgccaacgacaagggggcatggagt
ttcaccacggcaacactcaccgatggcaagcacaacctgacggcgaaggcgatggatgcg
tcggggcagacaagcgcggcgtcttcggcgctcggcgtcaccatcgatacgcatccgcct
gcggcaccgaagatcggatcgatctcctcggacggcaaggtggtgagcgatggtatcgtc
cattcggatcacgtgaccttcacgggtaccggcgaggccaacagcacggtcaagatctac
gacgggacgacgcagatcggcacggcaaccgcaaacaataagggcgcctggacttatacc
gcggacacgttgaaggatggttcccatcagttcagcgccaaggccatcgatctggccggc
aacatcagtggtgcctccaaggctcagggcctgacgatcgattcgcatgcggcaggctca
ggtgggacgacggggccagcagattcacacggctggcctgatgcaaccactacgggcgtt
cctgctggcgtgacactgacggcttcgggcgacgtgattatcgacaagccggggacggtg
atctccgggttcgatattcgcggcggcgtttacatcaacgccaacaacgtgacggttgag
aactgcaagatcacgtcgagcggttgggccgccgtcaaggtcaaatcgggcgtgacgggc
gcggtggtgcaggattgcactatcgacggcaccggccacggtcccgatggcaccggcaat
gaaggcatcatggggcagggcacgttcctgcgaaacaatatctccaacgtcgaaaacggc
atcacgatcaccggcagcaactcggtaatcaaggacaactatatccatcatctcaaagcc
ggcggttcgccgcactatgacggcattcagatcgacggtggcgtttccaatatccagatc
tcccacaactcgatcatcaatcaaaacggcgggacgtcggcgattatgatcgacaactac
ttcggggcggtctcgaacgtcgctgtgaacaacaatctgctggttggcggggcctacacg
gtctatgcggatggctcacagggcagcaaaccgattaccggtgtctcgttcaccgacaac
catataggcggtggccagtatgggccggcgttgatccggggaaacaagccggtctacacc
ggtaacgtcgacgacggcgccaccctggcccagggacttcatacgacaggccagccgagc
ggatcgttgcagacgtcgacaacggacgcgcctcatgcgttggccattgcgtcggtctcc
aacgacggcggggtcgtcggcgatggcacgcacagcctgacggcgaaggccgtggatgtg
tcgggccaggccagcgcggcgtcttcggttccgggcgtgaccatcgacaccaaggcgccg
gacgcgccgaagatcggatcgatctcttcggacggcaaggtggtgagcgatggcgttgcc
cattcgggtcacgtgagcttggctggcaccgccgaggctcacagcaccgtcaaggtctat
gacgggacgacgcagatcggcaccgcgaccgccaatgacaagggagcatggacctatgac
gccgccgccctgaaggacggcagtcatcagttcagcgccaaggccatggatctgaccggc
aatatcagtggtgcctccaaggcgcagggtctgactgtagatacgcacaccgatggatcg
tcaggtggctcctcgggtcaccatggcggcgggctctcggctgatttcacgagcatgttc
cataacgggaacgacaccgtgacattcaaggggaccgctgatccgtacagccagatctcg
atctacgacaacggcaagggtgacgcgctcggcgttgccaaggccggtgctgacggaaag
tggagcttcaacaccaagtctgcagtctcggatacggtacacaacttcactgcggaggtc
acgaacaaggccggccatacgggctcgagttcgggcagtgccattctcggcacgggtgga
aacgatgtgctgaaaagcacgtcgggcaatgacctgttccatggacacggaggtcatgac
actttcgtgttcgcgccgaacttcggtgcggatgtcatcactgacttccgggcgagcggt
cgcagccacgacgtggtgcagttcagcaagagtgtgttcgacaatttcgcggacgtcttg
tcccacgcggcacagagcggacacgatgttgccatcgactccggcggaggcaatacgctg
acgctgaaggatacgaagctggcggcgctggacaagaccgacttccatttcgtgtag
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