Nitrobacter hamburgensis: Nham_3048
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Entry
Nham_3048 CDS
T00348
Name
(GenBank) ABC transporter related protein
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
nha
Nitrobacter hamburgensis
Pathway
nha02010
ABC transporters
nha03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Nham_3048
03070 Bacterial secretion system
Nham_3048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nha02000
]
Nham_3048
02044 Secretion system [BR:
nha02044
]
Nham_3048
Transporters [BR:
nha02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Nham_3048
Secretion system [BR:
nha02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Nham_3048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_25
LPD22
SbcC_Walker_B
NB-ARC
nSTAND3
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABE63794
UniProt:
Q1QJ03
LinkDB
All DBs
Position
complement(3360131..3362353)
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AA seq
740 aa
AA seq
DB search
MLQRISDNAGPDRDAAVPPAASQPERPNLQARTALECLASVARHHGIDLAADRLRHLYAV
DNAPMSQARIQRIAKEAGMRARAAHLNWDRLHRLGEIYPVVAQLANGNWVLVLGAQDGPA
GEAVSVFDPLAERPDPLVIKKNCFCANWHGDVLLIKRDRGASGAPRKFGFRWFAPELLRE
RRLLADVAVAAVLLYALGLVIPLFFQLVIDKVLVHESFTTLYVLAAGAVIALLFDSVFSF
LRRYLLLYATNKIDIRVATKTFGHLLGLPISFFEHISSGVLVKHMQQATRIREFLTGRLF
LTLLDALSLLVFLPVLALYSLKLTCLVLAFTALTGVVVTLLVGPFRRRLYGLYQAEGARQ
ALLVEAVHGMRTVKSLAMEPLQGRVWDDRCAQSVSMRFGVEKISAAAQSVTGFLEKLMTL
GIIGLGALDVFSGEMTIGALVAFNMLAGRVSGPLVQMVTMVHEYQEVALAVQMLGEIMNQ
AREREGKRDGLRPELDGHIEFENVSFRYGPEGPPALDNISFTIPAGSVFGIVGRSGSGKT
TLTRMIAGLYPIQQGLLRIDGFDSRELDLVHLRKSLGLVLQENFLFCGTVRENITCAKRG
ATFEEVAQAARLAGADEFIERLPRGFDTMLEENAENLSGGQRQRLAIARALITNPRLLIL
DEATSALDAESETIIRRNLRRIAEGRTVIIVSHRLSMLSDANAILVIDRGRVSDLGHHDQ
LMKNCTAYRQLWNQQMKQIA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaacgaatttccgataacgccgggcccgatcgcgacgctgcggtgcccccggcc
gccagccagccagagcgcccgaacttgcaggcacggaccgcgctcgaatgtctggcgagc
gtcgcaagacaccatggcattgatctggccgccgaccggttgcgccatttgtatgccgtc
gataatgcgccgatgtcgcaggcgcggattcagcgcatcgccaaggaagcagggatgcgc
gcgcgggcggcgcatctgaactgggacaggttgcaccggcttggcgagatctatccggtg
gtggctcaacttgccaatggcaactgggttctcgtgcttggagcccaagacggcccggca
ggcgaggcggtgagtgttttcgatccgcttgcggagcgaccggatccactggtcatcaaa
aaaaactgcttctgtgcgaactggcacggcgacgtgctgttgatcaagcgagatcgcggg
gcatctggagcgccgcgaaaattcggcttccgctggttcgcccccgaattgttgcgcgag
cggaggctgctcgccgatgtggccgtggccgccgtgctgctctatgcgctcggtttggtc
attccactattcttccagttggtcatcgacaaggtcctggtgcacgagagcttcacgacg
ctctatgtgctggcggcaggcgcggtgatcgcgctgctgttcgattcggtgttcagcttc
ctgcgccgttatctgttgctctatgccacgaacaagatcgacattcgtgttgcgacgaaa
acgtttgggcatcttctgggtttgccgatcagcttctttgaacacatttcgtccggcgtg
ctcgtgaagcatatgcagcaggcgacgcgcatccgggaatttctgaccggacgtttgttc
ctgaccttgcttgatgctctgtcgcttctggtcttccttcctgtgcttgctctctacagc
ctcaagctgacgtgcctggtgctggctttcacggccctcaccggagttgtggtcaccctg
ctggtggggccgttccggcgacgtctttacggtctttaccaggccgagggcgcgcgtcag
gcattgctagtcgaggccgtgcatggaatgcgcaccgtcaaatcgctggcgatggagccg
ctgcagggaagggtgtgggatgatcgttgcgcgcagtccgtttcgatgagattcggtgtc
gagaaaatatcggctgccgcgcaatcggtcacaggctttctggaaaagctgatgacgctc
ggaatcatcggccttggcgcccttgatgtcttcagcggtgagatgacgatcggtgcgctg
gttgctttcaatatgctggctggtcgcgtctccgggccgctcgtccagatggtgacgatg
gttcatgaatatcaggaagtcgccctggccgtgcaaatgctcggtgagatcatgaaccag
gctcgcgagcgagagggcaagcgggatgggttgcgtcctgaactggacgggcatatcgaa
ttcgagaatgtgtcgtttcgctacggtccggaggggcccccggcgctcgacaacatctcg
ttcacgattccagcggggagcgtgtttggcattgtcggccgaagcggttccggcaagacg
acgctgacccgcatgatcgccggcctgtatccgattcagcagggtctgttgcgcatcgac
gggttcgactcgcgcgagctggatctcgttcatctgcgcaagagtctcgggcttgtcctg
caggagaatttcctgttttgcggcaccgttcgcgagaacatcacatgcgccaagcgcggg
gccactttcgaggaagttgcccaggcggcacgccttgcaggcgccgacgagttcatcgag
cggctgccgcgcggcttcgataccatgctggaagagaatgccgaaaatctttccggcggc
cagcggcagcgcctcgccatcgcgcgagctctgatcaccaatccgcgtttgctgattctc
gacgaggcgacgagcgcgctggacgccgaaagcgaaacgatcattcgtcgaaaccttcgg
cgcatcgcggaagggcgcacggtcatcattgtttctcaccggctgtcgatgctgtcggat
gccaacgcaatcctagtgattgatcgcggccgggtctctgacctgggtcatcatgatcag
ctgatgaagaactgcacggcctatcggcagctttggaatcagcagatgaagcaaatcgca
tga
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