KEGG   Nitrobacter hamburgensis: Nham_3871
Entry
Nham_3871         CDS       T00348                                 
Name
(GenBank) conserved hypothetical protein
  KO
K10979  DNA end-binding protein Ku
Organism
nha  Nitrobacter hamburgensis
Pathway
nha03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nha00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Nham_3871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nha03400]
    Nham_3871
DNA repair and recombination proteins [BR:nha03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Nham_3871
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ABE64571
UniProt: Q1QGS6
LinkDB
Position
complement(4251423..4252361)
AA seq 312 aa
MAPRANWKGFLKLSLVTCPVALFPATSETEKVTFNQINKQTGHRIKYTKVDAETGDEVAS
EDIIKGYKVDIDTYVTVDKDELENLALESTRTIDIDEFVPRSEIDELYLVRPYYIVPDGK
VGHDAYAVIRETIRTMDKVAIARVVLTNREHIIALEARGKGLVGMLLRYPYEIRDENEYF
DDIQDVKVTKEMLDLARHIVETKSADFEPEKFEDRYENALVELLNQKRKGEPVRTAVKSR
DTGNVINLMDALRKSLTTEGKTSTPSATKKQSKKPPSGQREMLMAIPGKGEGKKAAAKEP
KKSRPARARKAG
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgccgcgggcaaattggaagggctttctgaagctgtcgttggtgacctgtccggtg
gcgctttttccggcgacgtcggagaccgaaaaggtcactttcaaccaaatcaacaagcag
accggccatcgcatcaagtacaccaaggtcgacgccgagaccggtgacgaggtggcctcc
gaagacatcatcaagggctacaaggtcgacatcgacacctacgtcaccgtcgacaaggac
gagctcgagaacctcgcactcgaaagcacccggaccatcgacatcgacgaattcgttccg
cggtccgaaatcgatgagctttacctggtgcggccttattacatcgtgccggacggcaag
gtcggccacgacgcctacgcggtcatccgcgaaaccattcggacgatggacaaggtcgcg
atcgcacgcgtcgtcctgaccaaccgcgagcacatcatcgcgctcgaggcgcgggggaag
ggcctcgtcggcatgcttttgcgatacccctacgagattcgcgacgagaacgaatacttc
gacgacatccaggacgtgaaggtcacgaaggaaatgctcgacctggccaggcacatcgtg
gagaccaagtccgccgatttcgaacccgaaaagttcgaggaccgctacgaaaacgcgctc
gtcgaactgctgaaccagaagcgcaagggcgagcctgtccgcacggcggtcaaatcgcgc
gataccggcaacgtcatcaatctgatggacgcgcttcgcaagagcctcacgaccgaaggc
aagacatccacgccttcggcaacgaagaagcaatccaagaaacctccctccggccagcgc
gagatgctgatggccatccccggcaagggcgaaggcaagaaggccgccgccaaagagccg
aagaaatcgcgcccggcacgcgcccgcaaggccggataa

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