Nitrobacter hamburgensis: Nham_3871
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Entry
Nham_3871 CDS
T00348
Name
(GenBank) conserved hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Nham_3871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_3871
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Nham_3871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ABE64571
UniProt:
Q1QGS6
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All DBs
Position
complement(4251423..4252361)
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AA seq
312 aa
AA seq
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MAPRANWKGFLKLSLVTCPVALFPATSETEKVTFNQINKQTGHRIKYTKVDAETGDEVAS
EDIIKGYKVDIDTYVTVDKDELENLALESTRTIDIDEFVPRSEIDELYLVRPYYIVPDGK
VGHDAYAVIRETIRTMDKVAIARVVLTNREHIIALEARGKGLVGMLLRYPYEIRDENEYF
DDIQDVKVTKEMLDLARHIVETKSADFEPEKFEDRYENALVELLNQKRKGEPVRTAVKSR
DTGNVINLMDALRKSLTTEGKTSTPSATKKQSKKPPSGQREMLMAIPGKGEGKKAAAKEP
KKSRPARARKAG
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcgggcaaattggaagggctttctgaagctgtcgttggtgacctgtccggtg
gcgctttttccggcgacgtcggagaccgaaaaggtcactttcaaccaaatcaacaagcag
accggccatcgcatcaagtacaccaaggtcgacgccgagaccggtgacgaggtggcctcc
gaagacatcatcaagggctacaaggtcgacatcgacacctacgtcaccgtcgacaaggac
gagctcgagaacctcgcactcgaaagcacccggaccatcgacatcgacgaattcgttccg
cggtccgaaatcgatgagctttacctggtgcggccttattacatcgtgccggacggcaag
gtcggccacgacgcctacgcggtcatccgcgaaaccattcggacgatggacaaggtcgcg
atcgcacgcgtcgtcctgaccaaccgcgagcacatcatcgcgctcgaggcgcgggggaag
ggcctcgtcggcatgcttttgcgatacccctacgagattcgcgacgagaacgaatacttc
gacgacatccaggacgtgaaggtcacgaaggaaatgctcgacctggccaggcacatcgtg
gagaccaagtccgccgatttcgaacccgaaaagttcgaggaccgctacgaaaacgcgctc
gtcgaactgctgaaccagaagcgcaagggcgagcctgtccgcacggcggtcaaatcgcgc
gataccggcaacgtcatcaatctgatggacgcgcttcgcaagagcctcacgaccgaaggc
aagacatccacgccttcggcaacgaagaagcaatccaagaaacctccctccggccagcgc
gagatgctgatggccatccccggcaagggcgaaggcaagaaggccgccgccaaagagccg
aagaaatcgcgcccggcacgcgcccgcaaggccggataa
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