Nitrobacter hamburgensis: Nham_3906
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Entry
Nham_3906 CDS
T00348
Name
(GenBank) conserved hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
nha
Nitrobacter hamburgensis
Pathway
nha03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Nham_3906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nha03400
]
Nham_3906
DNA repair and recombination proteins [BR:
nha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Nham_3906
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ABE64596
UniProt:
Q1QGQ1
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All DBs
Position
complement(4283832..4284641)
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AA seq
269 aa
AA seq
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MAPRAYWKGSLKLSLVTCPIALYPASTQAERTHFHQINTKSGHRLRQQMVDEQTGRVVDQ
DHKGRGYELSKGKYVPIEEEELEALKLESTHTIEIDDFVPAEDIDERYLDKPYYIVPNGK
AGADAFVLMRDAMKRKDKVALARVVLANREHVIALKPLGKGLLGTTLRYPYELRDEDYFA
DIPSPRVSKDMVDLASHMDKYEAALKALVKRKAAGKTIEAPDEKEEESNVINLMDALKQS
LGRKKAATPPIKGKKRTSARRRGRKRKAA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgtgcctattggaagggctcgctcaagctctcgctcgtgacctgtccgatc
gcgctctatccggcttcgacccaggcggaaagaactcacttccaccagatcaacactaag
tccggtcaccggctgaggcagcaaatggtcgacgaacagaccggcagggtcgttgaccag
gatcacaagggccgaggctacgaactctcgaagggtaagtacgtcccgatcgaggaggaa
gagctggaggctttgaagctcgaaagcacccacaccatcgagatcgacgatttcgtcccc
gccgaagatatcgacgagcggtatctggataagccttactacatagttccaaacggcaag
gcgggagccgatgcgttcgtcctcatgcgcgacgcgatgaagcgaaaggacaaggtcgcg
ctggcgcgcgtcgtgctcgccaatagggagcacgtcatcgcgctgaagcccctgggcaag
ggattgttggggacgacccttcgttatccctacgagttgagggatgaggattatttcgcc
gacattcccagtccgcgggtatccaaggacatggtcgatcttgcttctcacatggacaaa
tacgaggctgcgctgaaggcgctggtcaaacgcaaggccgcgggtaaaacgatcgaggcg
cccgacgagaaggaagaggaaagcaacgtcatcaacctgatggatgcgttgaaacagagc
ttgggccgcaaaaaagccgcgacgcctccgattaaaggaaagaagcggacatcggcgcgt
cgccgtggccgcaagcgaaaagccgcgtga
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