KEGG   Fusarium vanettenii: NECHADRAFT_100373
Entry
NECHADRAFT_100373 CDS       T01612                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
nhe  Fusarium vanettenii
Pathway
nhe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nhe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NECHADRAFT_100373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nhe03019]
    NECHADRAFT_100373
Messenger RNA biogenesis [BR:nhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     NECHADRAFT_100373
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     NECHADRAFT_100373
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9671960
NCBI-ProteinID: XP_003047975
JGI: 100373
UniProt: C7Z0U4
LinkDB
Position
5
AA seq 171 aa
MENLSISDAPPQGRGGGAPQPLPQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRS
WDQFANLVLQSTIERIFAPLPESAGSDQPAGLYADITHGIFLVRGENVLLLGEIDLDKDD
DPPPGFQRAELEVVKKLAEDKKVADKAKEKVRLKKLAKQGFEGENLGEIVF
NT seq 516 nt   +upstreamnt  +downstreamnt
atggagaacctgtccatctccgatgcccctccgcagggacgcggcggcggcgctccgcaa
ccgctgcctcagctgccgccgcagatgtttaccactgctgcgcagctgctggacctcaca
gacaagaagctcatggtcgccttgcgcgacgggagaaaacttattggggtgctaagaagt
tgggatcagttcgccaacctcgtcctccaatccacgatcgagcgcatctttgcgcctctt
cccgagtcggcaggcagcgaccaaccggcgggtctctacgctgacataacgcacggcatc
tttctcgtgcgcggcgaaaacgtgctcctcctcggcgagatcgacctcgacaaggatgac
gacccaccacccggattccagcgcgcggagctcgaggtagtcaagaagctggctgaggac
aagaaggtggcggacaaggcaaaggaaaaggtgaggctcaagaagttggccaagcagggc
tttgagggggagaatctgggagagattgtgttttag

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