Fusarium vanettenii: NECHADRAFT_100373
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Entry
NECHADRAFT_100373 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
nhe
Fusarium vanettenii
Pathway
nhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NECHADRAFT_100373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nhe03019
]
NECHADRAFT_100373
Messenger RNA biogenesis [BR:
nhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NECHADRAFT_100373
mRNA degradation factors
5'-3' decay
Lsm complex
NECHADRAFT_100373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
9671960
NCBI-ProteinID:
XP_003047975
JGI:
100373
UniProt:
C7Z0U4
LinkDB
All DBs
Position
5
AA seq
171 aa
AA seq
DB search
MENLSISDAPPQGRGGGAPQPLPQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRS
WDQFANLVLQSTIERIFAPLPESAGSDQPAGLYADITHGIFLVRGENVLLLGEIDLDKDD
DPPPGFQRAELEVVKKLAEDKKVADKAKEKVRLKKLAKQGFEGENLGEIVF
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctgtccatctccgatgcccctccgcagggacgcggcggcggcgctccgcaa
ccgctgcctcagctgccgccgcagatgtttaccactgctgcgcagctgctggacctcaca
gacaagaagctcatggtcgccttgcgcgacgggagaaaacttattggggtgctaagaagt
tgggatcagttcgccaacctcgtcctccaatccacgatcgagcgcatctttgcgcctctt
cccgagtcggcaggcagcgaccaaccggcgggtctctacgctgacataacgcacggcatc
tttctcgtgcgcggcgaaaacgtgctcctcctcggcgagatcgacctcgacaaggatgac
gacccaccacccggattccagcgcgcggagctcgaggtagtcaagaagctggctgaggac
aagaaggtggcggacaaggcaaaggaaaaggtgaggctcaagaagttggccaagcagggc
tttgagggggagaatctgggagagattgtgttttag
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