Fusarium vanettenii: NECHADRAFT_101368
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Entry
NECHADRAFT_101368 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nhe
Fusarium vanettenii
Pathway
nhe03022
Basal transcription factors
nhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECHADRAFT_101368
09124 Replication and repair
03420 Nucleotide excision repair
NECHADRAFT_101368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nhe03021
]
NECHADRAFT_101368
03400 DNA repair and recombination proteins [BR:
nhe03400
]
NECHADRAFT_101368
Transcription machinery [BR:
nhe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NECHADRAFT_101368
DNA repair and recombination proteins [BR:
nhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NECHADRAFT_101368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
9667556
NCBI-ProteinID:
XP_003048279
JGI:
101368
UniProt:
C7YZ98
LinkDB
All DBs
Position
8
AA seq
646 aa
AA seq
DB search
MAIPAGRTLFKKKDGILTLTSDHQFVTWTPNSGGPPTVSLSVSNITNLQQTPDTSAKVML
KVFEKASESAEPATYLFHFNTPEAKAEAKAVKDLLSSLLASSRTNDAGVPKPSAPGTGGS
STPTANGNVGSGSASMAFASAVNSQPTSLRWFDDAHLKNDIELQRSLMSKDTSLNQTYME
AMQTKPDSISGAAFNAQFWSTRTTLLRAHAIETNQKKGAYNVLSTVKPKTVDGELKLNIS
VEQVQMIFAQHPLIKRVYNENVPRLSEAEFWSRFFLSKLSKKLRGERVTENDPNDPLFDK
YDPSENTVAVQSKIMAQQVPHIIDIEANEENQGGFRSGNAKDIEMRPRTNVPIVKTLNSL
SEKIMANVAPSDANAEDVSGAYDTYNQLALRDLKGDAKEHRIMLNVKEQNKFFSKHETAP
SSNARLFEKQAPSDVLFEIQGDLETLEGDGAGGINLQAAIGFDEQSDSDDDAPKRAHVGS
RSALKAADKDVMKGVRQQRAQKYGHDSDALTPMGLPAELARKCSLTHATTIEFLHQFWNA
FLSGDPDRAAELQYLAESLSRSIARINAVADEADNEREEIIRTRKKEIRDHFERTGKKIR
WKADRVGGGRPAVMSLMQPTIDALEKAQADYQRALAAEGIKVSTEA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggccatcccagctggtcgcaccctcttcaagaagaaggatggcatcctgacgctcacc
agtgaccatcagtttgtcacctggactccaaactccggcggtcctcccaccgtctccctc
tctgtttccaacatcaccaaccttcaacagacaccagacacctcggcaaaggtgatgctc
aaggtctttgaaaaggcttctgagagtgccgaacctgctacatatctcttccatttcaac
accccagaggccaaagcagaggccaaagctgtaaaggacctcttgtcaagcctgttggct
tcttctcgcaccaacgatgccggcgtaccaaaaccatctgcccctggcacaggcggctct
tcaactccaacagcaaatggaaacgtgggtagtggctcagcatctatggcttttgccagt
gctgtcaactcgcaacctacctcgcttcgttggtttgatgatgctcacttgaagaacgac
attgaactacaacggtccctcatgtcaaaggacacaagtctcaaccagacatatatggaa
gctatgcaaactaaacccgattctatctcgggagccgctttcaacgcgcagttctggtcg
acgcggacaacccttctccgagctcatgccatcgagaccaaccagaagaagggagcctat
aacgttctctcgacagtgaagcctaagactgtggatggagagctcaagctcaacattagt
gttgagcaggttcagatgatcttcgcccagcatcccctaatcaagcgcgtttacaacgag
aatgtgcctcggctctccgaggccgagttctggtctcggttctttctcagcaaactctcc
aagaagctacggggtgagcgagtcactgagaatgatcccaatgatcccctcttcgacaag
tacgaccccagcgagaatacggtagctgtgcagagcaagatcatggcacagcaggttcct
cacatcatcgacatcgaggccaacgaggagaaccagggcggattcaggagcggcaatgcc
aaggatattgagatgcgtcctagaactaatgttcccattgtcaagaccctcaacagcctc
agtgagaagattatggccaacgttgccccatctgatgccaacgccgaggatgtcagtgga
gcttacgacacttataaccagcttgcactccgtgatctcaagggggatgccaaggagcat
cgcatcatgctcaacgttaaggagcagaacaagtttttctccaaacatgaaacagcgccc
tcgtccaatgcccgcctattcgaaaagcaggcccccagcgatgtgctcttcgagattcag
ggtgatctcgagaccctcgagggcgacggtgcaggaggcatcaatctccaagcagccatt
gggtttgatgaacagagcgatagcgatgacgatgcccctaagcgtgctcacgttggttca
cggtctgctctgaaagctgcggacaaggacgtcatgaagggcgttcgtcaacaacgtgcc
caaaagtatggacatgactctgatgcccttacacccatgggtcttcctgctgaacttgct
cggaagtgcagcctaactcatgccacaaccatcgagttcctacaccagttctggaacgct
ttcctctcaggagacccggatcgtgctgccgaactgcagtaccttgccgagtcactgagc
cgctccatcgcacgcatcaacgctgttgcagatgaggccgacaatgagcgagaggaaatc
attcgtacccgcaagaaagagatccgtgatcactttgagcgtacgggaaagaagatccgc
tggaaggcagacagagttggcggtggccgtccagccgtcatgtcgctgatgcagccgact
attgatgccctggagaaagcccaggcggattaccagagagctctggccgcagagggaatc
aaggtgtccacagaagcatga
DBGET
integrated database retrieval system
