Fusarium vanettenii: NECHADRAFT_106167
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Entry
NECHADRAFT_106167 CDS
T01612
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nhe
Fusarium vanettenii
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NECHADRAFT_106167
Enzymes [BR:
nhe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
NECHADRAFT_106167
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Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
DUF4198
CarbopepD_reg_2
DUF6795
Motif
Other DBs
NCBI-GeneID:
9669854
NCBI-ProteinID:
XP_003042611
JGI:
106167
UniProt:
C7ZGI8
LinkDB
All DBs
Position
6
AA seq
565 aa
AA seq
DB search
MRLYPISLLTFLSPLVGASRGPFLEETGDGSWVIGNDLWNVTQGPVYAKNLFWQGIPGAD
LVGSASGHYVGYDGESNLVFTDAKVAAKGTHFIDVSFEATAGDLHWVIFDDLSGAYQYFV
NRALPDISIFRTLWRLNPDYFTHGRTHLKDEPLPDFSLYSTGTNVQDETWQLADGSFITK
YDWSNAVRDRDFYGVYGSKVGSWWIHPSTEYYNSDHLSQTLTVHRESKTGDAVQLNVVQD
TSHFRVGQKTAQPAGKIWGPWLWYLNNGSRVDVAHRRQEELRHFPYNWLNNKAYSARGGV
QGTLRLSDGRPASNAAVFLGDADTSIRPSVQGSNYYYTTYTNDKGRFSFDDVRTGSYGLY
ASSNGGKLADVYTNFTKSDITITKDKTLNLGQLNWKVKDRAKRIWQVGAFDKTARGFKNG
GVPYQHGVTEDSPANLTFTVGKSQDSDWYYASSAIGTWTIEFEISKEDIAANKGALLSVS
LAGYSQSAALNIDVNGKVYGSLSKDVLTSDPALYRSGKTNGEWRFFQYEIEPEVLKEGVN
TVGFTVTRYTKWRGFLWDSIILEWA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcggctctatccaatctccctcttgacgtttctcagccctcttgtgggcgcgagtaga
ggcccgttcttggaagagacaggcgacggctcttgggtcattggcaatgatctatggaat
gtcacccaaggacctgtgtatgccaagaacctcttttggcaaggcatccctggagcagat
ctggtcgggtctgcctctggccactatgtcggatatgatggagaaagcaaccttgtcttc
actgacgccaaagtggcagcaaaagggacgcactttattgacgtcagctttgaagctacg
gctggagacctccactgggtcatctttgacgacctctccggagcataccaatactttgtc
aaccgcgccctgccagatatcagtatcttccgtactctttggaggctaaacccagactac
ttcactcacgggcgaacccatcttaaggacgagccactacctgacttctcgctctactct
acgggcaccaacgtgcaagatgagacctggcaactcgccgatggatcattcatcacgaag
tatgactggtccaacgctgtcagggaccgcgacttttatggtgtttacggctcaaaagtc
ggatcctggtggattcatccttcaaccgagtactacaacagcgatcacctcagccaaact
ttgactgttcaccgggagagcaagactggcgatgctgtacagctcaacgtcgtgcaagac
acttctcacttccgtgttggccaaaagactgcccaaccagccgggaagatctggggtcct
tggctgtggtacctgaacaatggtagtcgagtcgacgttgcacacagacggcaggaggag
cttcgacacttcccatacaactggcttaacaacaaggcctatagtgcgagaggcggcgtg
caaggaactcttcgcctttctgacggccgcccagcttccaatgcagccgtcttcctcggt
gacgccgacacttctattcggccatctgttcagggaagcaactactactatactacttac
accaacgataaaggtcggttctcgttcgatgacgtccgaactgggtcttacggtctctat
gcctcgtcaaacggaggaaagctcgcggatgtctacaccaacttcaccaagtcagatatc
accatcaccaaggacaagaccctgaacttgggtcagctgaactggaaggtgaaagataga
gccaagcggatctggcaagtcggggcctttgacaaaacggcgcgaggattcaagaacgga
ggggttccataccaacatggcgtgaccgaggatagccctgctaacttgacatttaccgtc
ggcaaatctcaagactcagactggtactacgcgtcctccgcgatcggaacgtggaccatc
gagttcgagatctcaaaggaggacattgccgccaacaagggagcgctgctgagtgtttca
ctagctggatactcacagagtgcagcactcaacatagacgtcaacggaaaggtgtacggc
tcgttgagcaaggacgtcttgacgagtgaccctgccctctacaggtccggcaagactaat
ggcgaatggcgcttctttcagtacgagattgagccagaggtgttgaaggagggcgtcaat
acggttgggtttactgtcacacggtataccaagtggagaggctttctgtgggatagcatt
atcttggagtgggcgtga
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