Fusarium vanettenii: NECHADRAFT_106373
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Entry
NECHADRAFT_106373 CDS
T01612
Name
(RefSeq) polysaccharide lyase family 4
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
nhe
Fusarium vanettenii
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NECHADRAFT_106373
Enzymes [BR:
nhe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
NECHADRAFT_106373
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
9674890
NCBI-ProteinID:
XP_003050105
JGI:
106373
UniProt:
C7YUD4
LinkDB
All DBs
Position
9
AA seq
663 aa
AA seq
DB search
MKFRSVSLAALLLQAPQWVAAALKATESDTELVISNDRLYAAVQKPGGSIVKLTLDGTNL
LGTRSGSTGQGPYLDCYCTPKGFWTPGTMTPKYKLFKGKDSSGKDYGGIMMADTFTETGQ
VLEQYWFLRDGETGLHTFSRVAYHNEEQPFLRNLQELRTMFRPNSEMWTHLLTNEKHYAP
LPGKEAQSKQVVVQDATWYMGNTPDDAYVKQEADYFTKYTFQDNWRDIDAYGLFADGSKT
EDGDAYGAWLVMNTKDTYFGGPLHSDLTVDGILYNYISSNHHGDQTPNITHGFDRTFGPQ
YYHFNRFPADTDILTAQADAAQYADPEWNADFYDSIAKHVPNYVPSKNRGTFEVRVDLPK
GAKNPIAVLAQSGVDFQDNVFDVNAYQYWANLDGSGRATIPMVKAGMYRLTVYADGIFGQ
FTKDKIKIKAGKTEKTKVTWKEETSGKELWRIGTPDKTSGEYRHGFEPLTSKPLQPEQYR
IYWAQYDFPKDYPDGVHFKVGESDVGKDLNYVHWSVFGGRANYVRPEAYVGNGDVNNWTI
AFDLKESQVKRKKQATFTVQLAGAKTAAGNTDVYNASEPHSNLKYTVNINGKDLEPWVIP
SCAVRSSVSCYNIAHKFVFDAGLLSKGENEIVLSLPYNATDYESAVLPASVYVQYDALRL
EID
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccgcagcgtatccctcgccgccttgctgcttcaggcacctcaatgggttgcc
gcagctctcaaggcaaccgaatccgacactgagctggtcatctccaacgaccgcctctat
gccgctgttcagaagcctggtggctccatcgtgaagctcaccctcgatggaacgaacctc
ctgggcacgagatcgggctctaccggtcagggtccttacctcgactgctactgcacaccc
aagggattctggacccccggcaccatgacgcccaagtacaagctcttcaagggcaaggat
tcgagcggcaaggactacggcggcatcatgatggccgacacgttcaccgagacgggccag
gttctggagcagtactggttcctccgagacggcgagacgggcctgcacacctttagcagg
gtggcctaccacaacgaggagcagccgttcctgcgcaacctccaagagctgcgcaccatg
ttccggcccaacagcgagatgtggacgcacctcctgaccaacgagaagcattacgcgcct
ctcccaggaaaagaggcccagtcgaagcaggtcgtggtgcaggatgcgacgtggtatatg
ggcaacacgcctgatgatgcctatgtcaagcaggaggcggactactttacaaagtacacg
ttccaggacaactggcgtgatatcgacgcctatggactgttcgccgatggctccaagacc
gaggatggtgatgcttatggtgcttggcttgttatgaacaccaaggacacctactttgga
ggacctctgcactcggatctgactgtggatggtattctctacaactacatcagctccaac
caccacggagaccagactcccaacattacccatggcttcgaccgcacattcgggcctcaa
tactaccatttcaaccgcttccctgccgacacggatatcctgactgctcaggccgatgcc
gctcagtatgcggaccctgagtggaacgccgacttttacgactcgatcgccaagcatgtc
cccaactacgtcccatccaagaaccgcggcacctttgaggtcagggtcgatctgcccaag
ggagccaagaaccccatcgccgttctcgcccagagcggtgtcgacttccaagacaatgtg
tttgatgtcaacgcctaccagtactgggcgaatcttgatggtagcggcagagccaccatt
cccatggtcaaggctggcatgtaccgtctgaccgtctacgctgatggcatctttggacag
ttcaccaaggacaagatcaagatcaaggctggcaagactgaaaagacaaaggtcacctgg
aaggaagaaacttcgggcaaggagctctggcgcattggaacccccgacaagacctcgggt
gagtaccgccatggctttgagccgcttacgtccaagccgctgcagccggagcaataccgc
atctattgggcacaatacgacttccccaaggactaccccgatggtgttcacttcaaggtt
ggcgagagcgatgtcggcaaggacctcaactatgtgcactggagcgtgtttggtggacgg
gcaaactacgttcgccccgaggcttatgtcggtaacggcgatgtcaacaactggaccatc
gcttttgatctcaaggaatctcaggtcaagcgcaagaagcaggcgacctttacagttcag
ctcgctggagccaagactgccgccggaaatacggatgtgtacaacgcctcggagcctcac
tcgaacctcaagtacacggtcaacatcaacggcaaggatcttgagccgtgggttattccc
tcgtgtgccgtgcgctcttctgtgagttgctacaacattgcgcacaagtttgtctttgac
gctggtctcttgagcaagggcgagaacgagattgtgctgagtctgccttacaacgctacc
gactatgagtctgctgtgctgccggcttctgtttatgtgcagtacgacgctttgaggctt
gagattgactaa
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