Fusarium vanettenii: NECHADRAFT_122819
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Entry
NECHADRAFT_122819 CDS
T01612
Symbol
NFC2101
Name
(RefSeq) nucleosome remodeling factor CAF-I subunit
KO
K10752
histone-binding protein RBBP4
Organism
nhe
Fusarium vanettenii
Pathway
nhe03082
ATP-dependent chromatin remodeling
nhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NECHADRAFT_122819 (NFC2101)
03083 Polycomb repressive complex
NECHADRAFT_122819 (NFC2101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nhe03036
]
NECHADRAFT_122819 (NFC2101)
Chromosome and associated proteins [BR:
nhe03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
NECHADRAFT_122819 (NFC2101)
Histone modification proteins
HAT complexes
HATB complex
NECHADRAFT_122819 (NFC2101)
HDAC complexes
Sin3A-HDAC complex
NECHADRAFT_122819 (NFC2101)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
NECHADRAFT_122819 (NFC2101)
PRC2.2
NECHADRAFT_122819 (NFC2101)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
NECHADRAFT_122819 (NFC2101)
Heterochromatin formation proteins
Other heterochromatin formation proteins
NECHADRAFT_122819 (NFC2101)
Chromatin remodeling factors
NuRD complex
NECHADRAFT_122819 (NFC2101)
NuRF complex
NECHADRAFT_122819 (NFC2101)
NuRF complex (fruit fly)
NECHADRAFT_122819 (NFC2101)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
CAF1C_H4-bd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
MIOS_WD40
WD_LRWD1
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_RFWD3
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
9674851
NCBI-ProteinID:
XP_003050066
JGI:
122819
UniProt:
C7YU52
LinkDB
All DBs
Position
9
AA seq
408 aa
AA seq
DB search
MTHEEEDDQGERLINEGTALTWPTLTVQWFPDVKEPEGKNYRMHRLLLGTHTSDESPNFV
QIADVQIPKAVTPNPSDYDEDRGEIGGYGKSGNVAAIKCDIVQKIEHPGEVNKARFQPQN
PDIIATLCVDGKILIFDRTKHPLQPTSLGKINAQIELVGHKAEGFGLNWNPHEAGRLASG
SEDTTMCLWDLNTLKADSRILNPARKYTHHSQIVNDVQYHPISKNFIGSVSDDQTLQIVD
VRHSETAKAAVVARNGHLDAVNALAFNPNSEVLVATASADKTIGIWDLRNVKEKVHTLEG
HNDAVTSLAWHPTEAGILGSASYDRRIIFWDLSQVGEEQLPDDQDDGPPELLFMHGGHTN
HLADFSWNPNEPWLVASAAEDNLLQIWKVAESIVGKDDGDLPVDELDR
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacacacgaggaggaagatgatcagggagagcgcctgattaacgaaggaactgccctc
acctggccaaccctgacagttcagtggttccctgatgtcaaggagcctgagggcaagaac
taccgaatgcaccgccttctgctcggcactcacacatcggatgagagccccaacttcgtc
cagattgctgatgtccagatccccaaggctgtgacacctaaccccagcgactacgacgag
gaccgtggcgagattggtggctacggaaagtcgggcaatgtcgccgccatcaagtgtgac
attgtccagaagatcgagcatcccggagaagtgaacaaggctcgcttccaacctcagaac
cccgacatcattgctactctctgcgttgatggcaagattctgatctttgaccgaacgaaa
caccctctccagcctacctctcttggcaagatcaacgctcaaattgagcttgttggccac
aaggccgagggtttcggtctcaactggaacccccatgaggcgggccgcctcgcctcaggt
agcgaggatactaccatgtgcctctgggacctcaacaccctcaaggccgactccagaatt
ctgaaccccgcccgcaagtacactcatcacagccagattgtcaatgacgttcagtaccac
cccatctccaagaactttatcggttcagtttcggatgatcaaacgctccagatcgtcgat
gtccgacacagtgagaccgccaaggccgctgtggtggctcgcaacggccatctggatgca
gtcaacgcgctggcattcaatcctaactcggaggttcttgtcgctaccgcgtcggcagac
aagacgatcggtatctgggatctccgaaatgtcaaggagaaggttcacactctggagggc
cacaacgacgctgtcacatctctggcctggcatcctactgaggctggtatcttgggaagt
gccagctacgaccggagaatcattttctgggatctctctcaagtgggcgaagagcagctt
cccgacgaccaagacgatggcccccctgaattgcttttcatgcacggcggccacacgaac
catcttgccgactttagctggaaccctaacgagccgtggctcgtagcaagcgccgcggag
gacaatctgctgcagatttggaaggttgccgagtcgattgttggtaaggacgacggcgac
ctgcctgtcgatgagctcgaccgatag
DBGET
integrated database retrieval system
